Gene Sros_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0141 
Symbol 
ID8663406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp142690 
End bp143610 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content72% 
IMG OID 
ProductPrephenate dehydratase 
Protein accessionYP_003335938 
Protein GI271961742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.341146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAC TCGCCTATCT GGGACCGGAG GGCACCTTCA CCGAAGAGGC CCTGCGGATC 
CTGGCACCGC AAGCCGAGCG CCTGCCGCGC GCGAACGTCA GCGCGGCGCT GGACGCCGCC
CGGCGAGGTG AGGCCGACGG CGCCGTCGTG CCCCTGGAAA ACTCGCTCGA AGGCGCCATC
ACCACGACCC TGGACGAGTT CGCCTGGGGA GGGCCGCTGC TCATCACCGC CGAGCTGCTG
CTCCCCGTCG AGTTCTCGCT CCTGGCGCGG CCCGGCACCC GGATCGGCCG CATCAAGCGG
GTCTTCACCC ATCCGGCGGC CATCACCCAG TGCCGCACCT TCATCGCCCG CGAGCTGCCC
GACGCCGTGG TGGTCGCGGC CCCGTCGACC GCGGCGGCCG CCCAGGAGGT CGCCCTCCCC
GGCTCGCCGT ACGACGCCGC CATCGCCGCG CGCATCGCCG GAGAGCACTA CGGGCTGGTC
GAGCTGGCTA CCGGCATCGG TGACCGCTCC GACACCGTGA CCCGGTTCGT CCGCGTGTCC
CGCCCCGGTC CGCTGCCCGA GCCCACCGGC TCCGACCGCA CCACCCTGGT CGCCTTCCTC
ACCGACGACC ACCCGGGCGC GCTGCTGGAG ATGCTCACCG AGTTCTCCGT GCGCGGGGTC
AACCTGACCC GCATCGAGTC GCGGCCCACC GGTGACGGGA TCGGCCGTTA TTTCTTCCAC
TTCGACTTCG AGGGCCATGT GGCGGACGCC AGGGTCGGCG AGGCGATCTC CGGTCTCCAC
CGGATCTGCG CCGACGTGCG CTTCCTCGGC AGCTACCCGC GCGCCGACGG CCTTTCGCCG
CAGGTCAAGC GCGGTACGGC CAACGGCGAC TTCACCGAGG CCACGGGCTG GCTCTCCAGG
ATCCGCACCG GCCAGGTCTG A
 
Protein sequence
MPKLAYLGPE GTFTEEALRI LAPQAERLPR ANVSAALDAA RRGEADGAVV PLENSLEGAI 
TTTLDEFAWG GPLLITAELL LPVEFSLLAR PGTRIGRIKR VFTHPAAITQ CRTFIARELP
DAVVVAAPST AAAAQEVALP GSPYDAAIAA RIAGEHYGLV ELATGIGDRS DTVTRFVRVS
RPGPLPEPTG SDRTTLVAFL TDDHPGALLE MLTEFSVRGV NLTRIESRPT GDGIGRYFFH
FDFEGHVADA RVGEAISGLH RICADVRFLG SYPRADGLSP QVKRGTANGD FTEATGWLSR
IRTGQV