Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1513 |
Symbol | |
ID | 8658438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 1404951 |
End bp | 1405757 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | TPR repeat-containing protein |
Protein accession | YP_003330937 |
Protein GI | 270308879 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000018853 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATATC AAGAAGAGGA ACAGCTAAGA CTCAAGCGCC AGAGCAGTAA ACAGGCTGTA AGTTTAGCCA TGGAAGGACG CTGGCAAGAG GCGGTGGAGG TTAATAAAAA AATTATTGAC CAGTTCCCGA ATGATGTGGA AGCATTTAAC CGTCTGGGGC GGGCCTATCT GGAGCTGGCT ATTTATCCGG AGGCTATTGT TGCCTATACC CGTGCCAGAG AAATAGATCC TTATAATGTA ATAGCTGAAA AAAATCTGCA CCGGCTGGAA GTACTCAGCA AGGAAAATAC AACGGCTGGG CCGGTCATTC ACCGGGTTCA GCCCCAGGAT TTTCTTGAAG AAATCGGTAA AGCCGGGGTA ATAAACCTGA CCCGTCTGGC TCCCAAAGGG GTACTGGCCA GAATCGTAGC TGGTGACCAG CTTTGTCTGC GGATAGACGG TGCGAATCTG TGGGTGGAAA ACTGCGGCGG GGAAGTGCTG GGTATGGTTG ATATACCTAC TTCCAAGCGG CTGATAAAAC TGATGAAGGG CGGCAATAAA TATTCAGCCA CCGTCATCAG TTCCAATGAA GAAAAACTGG TGGTTATTAT CAGGGAAACC TTCCAGCATC CCTCACAGAT GGGTATACCT TCATTCTCGT CCAGAGGGCT TTCCAAGAGC TCTGCCGGCA CCGAGCCTGA TGAGAGTGAC AAGGAAGAAG GCGGATACGA GATAGAAGTA GATGAAACTG AACTGATGGC AGAAGAAGCT GAGGCTGAAA GCCAGACATA TACTGATGAT GAAAACGAGG GTGATCTGGA GGTTTAG
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Protein sequence | MAYQEEEQLR LKRQSSKQAV SLAMEGRWQE AVEVNKKIID QFPNDVEAFN RLGRAYLELA IYPEAIVAYT RAREIDPYNV IAEKNLHRLE VLSKENTTAG PVIHRVQPQD FLEEIGKAGV INLTRLAPKG VLARIVAGDQ LCLRIDGANL WVENCGGEVL GMVDIPTSKR LIKLMKGGNK YSATVISSNE EKLVVIIRET FQHPSQMGIP SFSSRGLSKS SAGTEPDESD KEEGGYEIEV DETELMAEEA EAESQTYTDD ENEGDLEV
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