| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1948 |
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| Symbol | |
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| ID | 8649478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylanimonas cellulosilytica DSM 15894 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013530 |
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| Strand | - |
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| Start bp | 2104758 |
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| End bp | 2106590 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | Collagen triple helix repeat protein |
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| Protein accession | YP_003326525 |
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| Protein GI | 269956736 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.584968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA CCACGTCGAG CCCGACCCGT CACGGCGCAG GCGGGGCGCA CCCGGTCGGC
TGCGGCTGCG GGGGCGGCGG CCAGTGCACC TACGGCCCGT TCACCCGCAA CAGCTACTGG
TACGGCAAGC TGATGCTGCC GCAGGACTTC ATCGACGAGC AGCAGTACGT GCGCGACAAG
ATCCGCCACC ACAACCAGCG GCTGCACGGC TGCGGCGTCG CGTGCGGGCT CGTCGTCGAG
CAGGACACGG CGCCGGACTG CCGGGACCGG ATCGTCGTCA TCACGCCCGG GACCGCTATC
GACTGCTGCG GCAACGAGAT CATCGTGACC GACCGCTACC GGCTCGAGCT GGCGACCCTG
CCCGCACTCG CGGCACTGTC CGGACCTGGA GCCGATCCCG AGGCCGTGCA CGAAGTGCGG
CTGTGCCTGC GCTACCGCGA GTGCGACACC GATCCGGTGC CGGTGCTGTA CGACGACTGC
GGGGGCGACG ACGGCCAGAC CGCCCCGAAC CGGGTGCTCG AGTCCTGGGA CGTCGACGCC
GTCGTCCTCC CGCCCGGGCC GGACGAGCCT GCGCCGGACG AGCCTGCGCC GGACGAGCCT
GCGCCGGACG AGCCTGCGCC GGACGAGCCT GCGCCGGCGG AGGCTGGGCT GGAGGAGCCC
GGGCTGGACG AGCCCGGGCT GGACGAGCCC GGGCCCGAGC CCGAGCCCGA CGTTCCGGCG
ACGGGCGCCT GCACGGAGCA CTGGAACACG CTGCCCGGGT GCCCGATCTG CGAAGACTCG
GCGTGCTCGT GCGTCGTGCT GGCCACCATC CACGGGTACC GGCCCGGCTT CGTGGTCCTC
GACGCCGACG CCGAGGCGAC CGCCGAGGCC GACCTGGCGG CCCAGATCGC CCGCATCGAC
AACCACGCAG GCCGGAGCGT GCTGCGCAGC ACGCAGGTGA TCAGCGAGAC CGTCGAGTGC
CTGCTGGAGC ACGGCGGCAC GGGAGGGGAG ACCGGGCCTG CGGGGCCAGA GGGACCAGTG
GGGCCGGCGG GGCCAGAAGG GCCAGAAGGG CCAGAAGGGC CGGCGGGGCC AGAGGGGCCC
GCGGGGGAGA AGGGCGACAC GGGTGAACCC GGGCCGCAGG GTCCACCGGG GGCCGCCGGT
GCCGCCGGTG CAGACGGTGC GACGGGTTCC GCAGGGGTGC CCGGCCCACA AGGGCCCGCA
GGCCCGGGGC TGGAGGCGGG CCTGGTCCAG ATCGCCGCCC TGAGCTGGAC GCACGCCGAC
ATGATCCTGG TCCAGGACCT GGAGACGCTG GAGATCGACG GCCGGCGGCG CCGGGGCGTG
ACGATCCAGT TCACCGAGAC CGTGCACCTG GCCCCGGAGG GGTTCACGCT GCCTGACGTC
CAGCACGTGC TCACGGTCGA GGCGCCGCAC GTGCGGTACA CGTTCCCGCC ACGAGAGGCG
GAGGACCGGG AGGTGGCCGC GAAGCAGGCC GAGCTCGACG CCTTCTACCG GTGCCGCTGT
CACGTGCTCG GCCAGGTGGT GCTGACCGAG GTGCAGGCGA TCGACGCGAC CGGCCGGATC
ACGTTGGCGA CGGACAAGAC GAGCGAGCCC GACGCCCTGT CGTTCGTCTT CCATGAGCGC
TTCCTCGACG CCTTGTTCGG CGCACTGGGG GACCCGCGCG GTGTCGACCT GTGGGTCAAG
CTCCGCGGCG AGTTCGTGCT GGACGCGCGA GAACGCGCGG TGGACGCGGA GTTCGCGCGC
GCCGGTCTCC CCACGGGCGA CCGCCCGAAG GGCGAGAAGC ACGGCATCCA GGGCGGCACC
TTCGAGAGCT GGCTCTACCC GGTGCTCGAC TGA
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| Protein sequence | MSTTTSSPTR HGAGGAHPVG CGCGGGGQCT YGPFTRNSYW YGKLMLPQDF IDEQQYVRDK
IRHHNQRLHG CGVACGLVVE QDTAPDCRDR IVVITPGTAI DCCGNEIIVT DRYRLELATL
PALAALSGPG ADPEAVHEVR LCLRYRECDT DPVPVLYDDC GGDDGQTAPN RVLESWDVDA
VVLPPGPDEP APDEPAPDEP APDEPAPDEP APAEAGLEEP GLDEPGLDEP GPEPEPDVPA
TGACTEHWNT LPGCPICEDS ACSCVVLATI HGYRPGFVVL DADAEATAEA DLAAQIARID
NHAGRSVLRS TQVISETVEC LLEHGGTGGE TGPAGPEGPV GPAGPEGPEG PEGPAGPEGP
AGEKGDTGEP GPQGPPGAAG AAGADGATGS AGVPGPQGPA GPGLEAGLVQ IAALSWTHAD
MILVQDLETL EIDGRRRRGV TIQFTETVHL APEGFTLPDV QHVLTVEAPH VRYTFPPREA
EDREVAAKQA ELDAFYRCRC HVLGQVVLTE VQAIDATGRI TLATDKTSEP DALSFVFHER
FLDALFGALG DPRGVDLWVK LRGEFVLDAR ERAVDAEFAR AGLPTGDRPK GEKHGIQGGT
FESWLYPVLD
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