| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_33530 |
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| Symbol | |
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| ID | 8634986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 3750633 |
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| End bp | 3755408 |
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| Gene Length | 4776 bp |
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| Protein Length | 1591 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | predicted extracellular nuclease |
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| Protein accession | YP_003316082 |
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| Protein GI | 269796627 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0542188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCACCCT CCGCAGCGGT CATCATCGAC GAGGTGTACG GCGGTGGCGG CAACAGCGGC
GCCACCCTGA AGAACGACTT CGTCACGCTC CACAACACGA CCGACCAGCC CGTCACCGTC
GACGGCTGGA GCATCAGGTA CGCGGCCGCG GGCAGCGGCT TCACCGCCGG CTCCCAGAGC
GCCCCGCTCA CCGGCGAGAT CCCCGCCAAG GGCTCCTACC TCGTCCAGCT GGCCCCCGGG
GCCGGCGGCA CCCTCGACCT GCCCACGCCC GACGCCCAGG CGGACATCCC GGCCGGTGCC
GCGAACGGCA CCTTCGCGCT CGTGTCGAGC ACCGACCCCC TGGTGTGCGC ACCCACGGCG
TGCGCGACCG ACCCCGCGGT CGTCGACCTC GTCGGCTACG GCACGGCGGC GACCTTCGCA
GGCACGGCGC CCGCACCGGT CCTCAGCGCC ACCACCTCGG CCTCACGGAC CGACTTCGCC
AACACCGGCG ACAACGCTGC CGACTTCGTC GCCGGCGCGC CGACCCCGGT GAACTCGAAC
GGCGACGGTC CTCCCGTACC GCCGCCGCCG GAGGACGCCG GTGACCTCAC CATCGCCCAG
ATCCAGGGCA CCGGTCCCGC GACGCCCTAC CTCGACCAGC AGGTCTCGAC CTCCGGGTAC
GTCACCGCGT CCTACCCGAC CGGTGGCTAC AACGGCTTCG TCATCCAGGA GGCCGGCACC
GGTCTCACCT GCCCCGCCGA GGGCGAGGCG TCCTCCGCGC TGTTCGTCTA CACCGCGAGC
GCACCCACCG TCGCCGTCGG CGACTACGTC GACGTGACCG GTGTCGCCGG CGAGTACGAC
GGGCTCACCC AGATCGCCAC ACCGACCGTC GCACCGGGCA CCGCCGAGGG CGCAGCCCCC
GTCGCCGCCG AGTGCGCGTG GCCCGCGACC GACGCGGGGC GCGAGTCCCT CGAGTCGATG
CTCGTGCTGC CGCAGGGTGG CTTCACGGTC ACCAACACGT ACACCACCCA CCAGTACGGC
GAGGTCGGCC TGGCCGTCGG TGACAGCCCG CTGCTGCAGC CGACCGACGT CGCGCCCTAC
GGCACGCCTG CTCACGACGC CGTGGTCGCG GACAACGCAG CCCGCGGTGT CGTGCTCGAC
GACGGCGCGT CGTGGAACTA CCTCAGCTCG CCGAACAACG CGAGCGTCCC GCCGTACGTC
ACCGCCGACG GCACCGTCCG CGTCGGGGCC TCGGTCGAGT TCACCGACCC GGTGGTCGTC
GACTTCCGCA ACGGGACCTG GAAGCTCAAC CCGACCTCGC AGGTCACCCC GGCCGACGTC
GACGCCTACC CGGTCGTCTT CTCGGGCGAG CGTCCTGCGG CGCCGGACAC CGCCGCCATC
GGTGACGCCG ACGTGACCGT GGCCGCGTTC AACGTGCTCA ACTACTTCAC GACGACCGGC
TCCACCGTCA CCGGGTGCTC CTCGTACACC GACCGCACCG GCGCGGGCAT CACCACGAAC
ACCTGCCCGG GCAACGGCCC GCGCGGTGCG TGGGACGCCG ACAACCTCGA GCGTCAGCAG
GACAAGATCG TCGACGCCAT CACCCGTCTC GACGCCGACG TCGTCGGTCT CATGGAGATC
GAGAACTCGG CAGCGCTCGG CGAGGCTCCC GACGAGGCCG TCGGCACGCT CGTGGCCGCG
CTCAACGCGG AGGCCGGCGA GGACCGCTGG GCCTTCGTCG AGTCCCCCGC CGACCTGCCG
GCCGTCGCCG ACCAGGACGT CATCTCCGGC GCGATCATCT ACCAGACGGC AGCCGTGACC
CCCGTCGGCG AGTCGCACGC GCTCGGGACC CTCAGCGGCG CCGGGCAGAC CTTCGTCAAC
GCCCGCGAGC CCATCGGGCA GGCCTTCGAG CCTGCTGACG GCGGCAAGCC GTTCTTCGTC
GTGGCGAACC ACTTCAAGTC GAAGTCCGCG GGCGGTGCCT CGGGCGCCGA GCGCGACCTC
GGCCAGGGTG CCTGGAACGC AGCGCGCACC GCTCAGGCGA CCGCGCTGGC GACGTGGGTC
GACGAGACCG CCCTCCCGGC CGTCTCCGCC GAGGCCGGCG TCCCGGTCGA GGACGTCCTG
CTGCTGGGCG ACTTCAACGC CTACACGCAC GAGGACCCGC TGCTGCACCT CTACGGGGCG
GGCTACCAGG ACGCGACGAC GCTCGAGGGC CGTGGTGAGC TCACCTACTC CTACCAGGGG
CTCAACGGCT CGCTCGACCA CGTGCTGCTC AACGAGTCGG CCGCCGAGCG CTTCACCGGC
TCGGACGTCT GGGAGATCAA CGCTCCCGAG TCGATCGCCC TCGAGTACTC GCGCTTCAAC
GTGACCGCCG GCGACTTCTA CCGCGCTGAC GCGTTCCGGT CCTCCGACCA CGACCCGGTG
GTCGTGGGCC TCACCGCCGG CGAGCCCGCG GCCGAGGCGA CGGAGACCAC CCTCACCCTG
CTCAACATCA ACGACTTCCA CGGCCGGATC GGCCTGTCCG GCGAGGACGG CAGCGGTCCG
TCCACGGTGG CCTTCGCCGG GACCGTCGAG GAGGAGCGCG CCGCAGCCGG CGAGGACAGC
ACCCTGTTCC TCTCCGCGGG CGACAACATC GGTGCGTCGC TGTTCACGTC GGCGATCCAG
CAGGACCAGC CGACCATCGA CGTCCTCAAC ACCCTCGAGC TGGCGTCCAG CGCCGTGGGC
AACCACGAGT TCGACAAGGG CTTCGACGAC CTCACCGGTC GTGTGTCCAC GGCCCTCGAC
GCCCCGTACC TCGGTGCGAA CGTCTACACC AAGGGCACCA GGGAGCCTGC TCTCGACGAG
TACAGCATCC ACGAGGTCGA CGGGGTCCGC GTCGCCGTGA TCGGCGTCGT CACGCAGGAG
ACGCCGTCGC TGGTGACGCC GGCCGGCATC GCCGACCTCG AGTTCGGCGA CCCCGTCGAC
GCGGTCAACC GCGTCGCGGC CCAGCTGACC GACGGCGACG AGAGCAACGG CGAGGCCGAC
GTCATCGTGG CCGAGTACCA CGAGGGCGCC GGAGCGGGCA CGCCCGACGG CGCGACCCTC
GCGGAGGAGG TCGCCGGTGG CGGCGCCTTC GCGAAGATCG TCACGGGCAC CTCGCCCGCG
GTCGACGTCA TCTTCACCGG GCACACCCAC AAGCAGTACG CCTGGGACGC TCCCGTCCCC
GGGACCACCG ACGGCTCGAC CCGTCCGATC CTGCAGACCG GGTCGTACGG CGAGTTCCTC
GGCAAGGTGA CGCTCGACGT GGACCTCGAG TCCCGTGACG TGGTCGACTA CACGGCCGTC
AACGTGCCGC GCACCACGAC GCCCGAGGAG ACCCTGGTCG CCACGTACCC GCGTGTCGCC
GAGGTCGAGC GGATCGTCGC CGACGCGGTC GCCTACGCCG ACGAGATCGG CTCGCAGCCG
GTCGGCTCGG TCACGGCCGA CATCACGACC GCCTTCGCGG GCGGCTCCGT CGTCGACGGT
GCCTACACCG GCGGCGAGCG CGACGACCGC GCCGAGGCCT CGACCCTCGG GACCCTGGTC
GGCAACGCCC TGCGGGACAG CCTCTCCGCG CTCCCGGCCG CGCCGGACTT CGGCGTGGTG
AACTCGGGCG GTCTCCGCGA GGAGCTCCTC TACGGCTCCG ACGGTGTCGT GACCTTCGCC
GAGGCCCTCG CGGTCCTGCC GTTCGCGAAC GACCTGACCA TCGTCACGCT CTCGGGCGAG
CAGGTCGTCA CGATGCTCGA GCAGCAGTGG CAGCGCACCG CCGACGGTGA GGTCCCCTCG
CGGCCGTACC TGCAGCTCGG GCTGTCGGAC AACGTCAGCT ACACCTACGA CGAGGTCCCC
GACCCGGCCG ACCCCACGCT CACCGTCGGG GTGGTCCGCT CCGTGACCAT CGACGGCGAG
CCGATCGACC TGGCTGCCGA CTACCGCATC GGGACCTTCT CGTTCCTCGC CTCCGGCGGG
GACAACTTCC GGGTCTTCGC GGACGCCTCC GAGACGGTCA ACACCGGTCT GCTCGACTGG
GAGGGCTGGG TCCAGTACCT GCAGGACAAC TCCCCCGTCG CGCCGAGCTA CGCGCGCTCC
GGCGTGCAGG TCTCGGGTGC CGAGGTCGTC GCGGGAGAGG GCCTGGCCCT CACCCCGGGG
CTGACCACCA CCGTCACCCT CGACCGTCTG GACCTGCGAA GCCTCGGGTC CCCGGCGAAC
ACCACGGTCA CCGCCACCCT CGGCGAGACC GAGGTCGGCA CGGCCACGGT CACCGACGGC
TCGGCCACGG TCGAGCTCAC GGTCCCGGAG GGCGTCGTCG CCTCCGAGCT CACCTTCACG
GCGGCACCCA GCGGGACCGT CGCGGTCCTG CCGGTCGCCC TCGGCGCACA GGGCTCCGAG
CCGACCGTGA CGCTCTCGTC GACCGAGGTC GTCGCGGGCG GGACCCTCGA CGTCCGCGTC
GAGGGTGGCA CGCCGGGACT CGCGACCGAG GTGTGGCTCA ACTCCGAGCC CGTCCTCCTC
GGCTCGCTCG TGCTCGACGC CGACGGCGCC GGGACGCTCA CGGTGACGAT CCCCCTCGCC
ACCGCGGTCG GGGACCACAC GATCCGTGTC CTCGGTGACG GCATCGACGT GAGCGCAGCG
CTCACTGTCC TCGCCGCCGA CGGCTCGGGC GCGGGTGCCG GGTCGGGCGA CGGTCTCGCC
TCGACCGGTG GCGACGTCCT GAGCCTCGCG GTCCTCGCGG CTCTCGCCCT GGTCGGTGGT
GGGCTGCTCG TGGCCCGCAG GCGCCAGCAG GCCTGA
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| Protein sequence | MSPSAAVIID EVYGGGGNSG ATLKNDFVTL HNTTDQPVTV DGWSIRYAAA GSGFTAGSQS
APLTGEIPAK GSYLVQLAPG AGGTLDLPTP DAQADIPAGA ANGTFALVSS TDPLVCAPTA
CATDPAVVDL VGYGTAATFA GTAPAPVLSA TTSASRTDFA NTGDNAADFV AGAPTPVNSN
GDGPPVPPPP EDAGDLTIAQ IQGTGPATPY LDQQVSTSGY VTASYPTGGY NGFVIQEAGT
GLTCPAEGEA SSALFVYTAS APTVAVGDYV DVTGVAGEYD GLTQIATPTV APGTAEGAAP
VAAECAWPAT DAGRESLESM LVLPQGGFTV TNTYTTHQYG EVGLAVGDSP LLQPTDVAPY
GTPAHDAVVA DNAARGVVLD DGASWNYLSS PNNASVPPYV TADGTVRVGA SVEFTDPVVV
DFRNGTWKLN PTSQVTPADV DAYPVVFSGE RPAAPDTAAI GDADVTVAAF NVLNYFTTTG
STVTGCSSYT DRTGAGITTN TCPGNGPRGA WDADNLERQQ DKIVDAITRL DADVVGLMEI
ENSAALGEAP DEAVGTLVAA LNAEAGEDRW AFVESPADLP AVADQDVISG AIIYQTAAVT
PVGESHALGT LSGAGQTFVN AREPIGQAFE PADGGKPFFV VANHFKSKSA GGASGAERDL
GQGAWNAART AQATALATWV DETALPAVSA EAGVPVEDVL LLGDFNAYTH EDPLLHLYGA
GYQDATTLEG RGELTYSYQG LNGSLDHVLL NESAAERFTG SDVWEINAPE SIALEYSRFN
VTAGDFYRAD AFRSSDHDPV VVGLTAGEPA AEATETTLTL LNINDFHGRI GLSGEDGSGP
STVAFAGTVE EERAAAGEDS TLFLSAGDNI GASLFTSAIQ QDQPTIDVLN TLELASSAVG
NHEFDKGFDD LTGRVSTALD APYLGANVYT KGTREPALDE YSIHEVDGVR VAVIGVVTQE
TPSLVTPAGI ADLEFGDPVD AVNRVAAQLT DGDESNGEAD VIVAEYHEGA GAGTPDGATL
AEEVAGGGAF AKIVTGTSPA VDVIFTGHTH KQYAWDAPVP GTTDGSTRPI LQTGSYGEFL
GKVTLDVDLE SRDVVDYTAV NVPRTTTPEE TLVATYPRVA EVERIVADAV AYADEIGSQP
VGSVTADITT AFAGGSVVDG AYTGGERDDR AEASTLGTLV GNALRDSLSA LPAAPDFGVV
NSGGLREELL YGSDGVVTFA EALAVLPFAN DLTIVTLSGE QVVTMLEQQW QRTADGEVPS
RPYLQLGLSD NVSYTYDEVP DPADPTLTVG VVRSVTIDGE PIDLAADYRI GTFSFLASGG
DNFRVFADAS ETVNTGLLDW EGWVQYLQDN SPVAPSYARS GVQVSGAEVV AGEGLALTPG
LTTTVTLDRL DLRSLGSPAN TTVTATLGET EVGTATVTDG SATVELTVPE GVVASELTFT
AAPSGTVAVL PVALGAQGSE PTVTLSSTEV VAGGTLDVRV EGGTPGLATE VWLNSEPVLL
GSLVLDADGA GTLTVTIPLA TAVGDHTIRV LGDGIDVSAA LTVLAADGSG AGAGSGDGLA
STGGDVLSLA VLAALALVGG GLLVARRRQQ A
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