Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_28060 |
Symbol | |
ID | 8634440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 3128554 |
End bp | 3134760 |
Gene Length | 6207 bp |
Protein Length | 2068 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | alpha-1,6-glucosidase, pullulanase-type |
Protein accession | YP_003315542 |
Protein GI | 269796087 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.329007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGATGC TGGGGGCCAG CCTCGCCGGG GTGGCCGGCA CCGTGACGGC CGCGCCGTCC GCCGCCGAGC CCGCTGCTCC GCGCCTCGTC GGCTCGCTCC AGACCGAGCT CGGCTGCGCC GAGGACTGGG CGCCCGCCTG CGACGCCGGG GCGCTCTCGC CCACGGCCAC CGACGGCCTC TTCTCGACCA CCGTCACGCT CCCCGGCGGC GACTACGAGC TCAAGGTGCT CGCCGGGACC ACCTGGGACG ACCCGTCGTG GGGCCGCGCC GGGGCGACCG GTGCCGACGC CGCCAACATC CGCCTGCACA CCGCCGGCGA GGCCGAGCTC GAGGTCTTCT TCGACACCGA GACCGGCCGC ACGAGCTTCG TGCCCACGGC GGACGTCCCC GAGCCGACCG AGGCCGACGC GCCCGCGCCG GTGCGCCAGC CGGGCGGCGA CGAGCAGTTC TACTTCGTCC TCACCGACCG GTTCGCCAAC GGCGACACCG CCAACGACAC GGGCTACGTG ACGGTCGACG GCGTGCCGGC GACCGACCGG CTCGAGCACG GCTTCGACCC GACGGACAAG GGCTTCTACC ACGGTGGCGA CATCGCCGGG CTGCGCCAGA ACCTCGACTA CATCGAGGGG CTCGGCACCA CCGCGATCTG GCTCACGCCG TCCTTCGAGA ACCGCCCTGT CCAGGGCACC GGCGCCGACG CGTCGGCCGG CTACCACGGC TACTGGATCA CCGACTTCCT GTCGATCGAC CCGCACCTCG GGACCAACGA AGAGCTCGAC GGCCTCATCG CGGAGGCGCA CGCCCGCGAC ATCAAGGTCT ACTTCGACAT CATCACCAAC CACACGGCCG ACATCATCGA CTACGAGGAG GGCGAGTACA CCTACCGCCC GACCACGACG GAGCCGTACA CGCCCTTCGT GCCGATCGGC CTCGAGGACG TCAAGAACCC CGCCTGGCTC AACGACCCGG CGTTCTACAA CAACCGCGGG AACTCCACCT GGGCGGGGGA GTCGGTGATC CTCGGCGACT TCGACGGGCT TGACGACCTC GACACCTCGC AGCAGGCCGT GGTCGACGGC TTCGTCGACA TCTACCAGCA CTGGGCTGAC GCCGGGATCG ACGGCTTCCG GATCGACACC GTCAAGCACG TGGACTTCTC GTTCTGGGAG CAGTGGACCA CCGCCATCAA GGAGGCCACG GACAACCCCG AGTTCTTCAT GTTCGGCGAG GTCTACGACG CCGACCCGAC CAAGCTGTCG CCGTACGTGC GCGACACCGA CATGGACTCC GTCCTCGACT TCACCTACCA GTCGGCCGCG GCGGCCTTCG CCGACGGCAG CGGCCCTCGC GTCCTCCAGC GGCTCTTCGA CGGCGACGCG TACTACACGA CGCCGACCAA GAACGCGCAC GCCCTGCCGA CCTTCCTCGG CAACCACGAC ATGGGCCGCC TCGGCTACGT CGTCAAGGGG CGCGAGGACG CGCTCCAGCG CTCCGAGCTC GCGCACTCGC TCATGTACCT CACCCGCGGC CAGCCCGTCG TCTACTACGG CGACGAGCAG GGCTTCGTGG GGAGCGTCGG CGACGGCAAG GACAAGAACT CCCGGCAGTC GCTCTTCGAC TCGCAGGTCG CCGAGTTCCG GGACCAGGCC CTGCTCGACG GGTCCTCCGG CGCCGGTGAC CACTACGGCA CCGACGGCGC GCTCTACACG CACATCGCGG GCCTCGCGGC GCTGCGCAGC GCGCACCCCG CGCTGTCCGA CGGTGCGCAG GTCGAGCAGC ACGTCGCCGC GGGAGCAGGC GTCTACGCCT TCTCCCGCGT CGACACCGCG GCCGACGCCC CGGCCGAGTA CCTCGTGGCC GTCAACAACG CGACGACGGA GTCGACGGTC GAGCTGACCG CCCTCACCCC GGACGCGACC TTCGCGCCGC TCTACGGCAC CGACGCCACC GCGACCTCCG GGGCCGACGG CACCGTCGCG GTGACCGTCC CGGCCCTCGG CGCCGTCGTC CTGCAGGCGC AGTCGCCGCT GACCGCCGAC GCAGACCCCG TGGCACCGAC CTTCAGCACC CCGGTGCTCG GCCAGGGCCT CGAGGGGCTC CAGGAGATCG CGGTCGACCT CGGCACCGAG CGCTACGCGG AGACGACCAT CTCCTCCCGC GTGGTCGGGG CCTCGGAGTG GGAGCTGCTC GGCACGATCG ACGACGGTGC CCCGCGCCTG TTCCAGGACG TCGCCGACGT CCCGCCCGGC ACGGTGATGG AGTACCGCGC CGTCGTGCGC GACGCCGACG ACCGTCTCAC GCAGACCGTC GTGTCGGCGA GCGTCGGTGA CGACCACGGC ACCGGTGCAC CGCTGCCCAC CGACGGCCCG CCGCCGCTCC GCGACGTCAC CGTCTCGGTG GCCGGGACCA TGAACCCGGC GATGGGCTGC TCGGCCGCCT GGATGCCCGC CTGCGACGAC GCGGTGCTCT CCGAGCGTGC CGGGTCGGTC TTCTCCGGGA CCTGGACGCT CCCCGCCGGG GACTACGAGT ACAAGGTCGC CATCGACCAG GCCTGGACCG AGAGCTACGG GCGGGACGGT GAGAACGTCA CGTTCACCCT CCCGGCCGAG CAGGAGGTCA CCTTCGTCTA CGACGACCTC ACCCACCGGG TGGCGCACTT CTTCGAGGGC AGCCCCGACG GGCGCCTCGC CGTCGCCGCC GGGAGCTTCC AGACGCACCT CGGCTGCGCG GGCGACTGGG ACCCCACCTG CCTCGGCTCG TGGATGGCGC CGGACGGTGA CGACACCTAC ACGCTGACCA CCAACCGCAT CCCGGCCGGG CTCTACGAGA CCAAGACGGC CTTCGGTCGC GGCTGGGACG GTGCTCTGCC GGCGCAGAAC CTCGGTTTCG AGGTTCCCGT CGACTGGGCC ACGATGGTCT TCACGCTCGA CGCGACGACG GGAGAGATGA CGGTGGCTGC TGACCAGAGC GTCCCCGGGG ACGGCGACCG CGCGTTCTGG CTCGACGCCA GGACCCTCGC GCTCCCGGCC GCGGCCGTGC CGGACGGTGG GGACCCCGCC GCCCGCACCT GGACGCTGCA CGGCGCGCCG ACCGGCGGGA TCACCGTGGC CGACGGCGTC GTCACGACGC CGGGAGGCTC CGACCTCCCG CTCACGCTCC TCCCGGACGG TGTCCCCGAG GACCTCCAGG CCCGGCACCC GCTGGTGGAC GGCTACCTGG CCGTCTCCCT CGACGAGGCC GTGACCGACG AGCAGGTCGC CGAGCTGCTC ACCGGGGAGC TGCGTCTCAC GCAGTCCGGA CCCACGGGTC TCGAGTACTC GACCGGCGTG CAGGTCGCCG GGGTCGTCGA CGACCTCTTC ACCGTCGCCT CGGACGTCAC GCTCGGGGCC ACGTGGGACG GCGACGTGCC CACCCTCGCG CTGTGGGCCC CGACCGCGAG GTCGGTGACC ACCCGCGTGT GGCTCGACGG CGACGGGGTC GCCGCGGGCA ACCCGACCGA CGTCCCGGCC GAGCGTCAGG CCGACGGCAC CTGGGTCACC CAGGGTGCAG CCGGCTGGAA GGACGCGGCC TACGTCTACG ACGTCGAGGT GTACGTGCAC TCGACGGGCG CCGTCGAGCA CAACGTCGTC ACCGACCCCG CGTCGGTGGC GCTCACGCTC AACTCCGAGC AGTCCGTGCT GGTCGACCTC AGCGACCCGG CGTACATGCC GAGCGTGTGG GCCGACACCC CGGCGCCGGT CGTCGAGCGC GACGTCGACC GCAGCATCTA CGAGCTGCAC GTCCGTGACT TCTCGATCAG CGACGAGTCC GTCCCGGAGG CGGAGCGTGG CACCTACATG GCGTTCACGC GAGAGTCGGA CGGCATGAAG CACCTGCGGA CCCTCGCGGC CGCAGGCCTC AACACCGTGC ACCTGCTGCC CACCTTCGAC ATCGCCACGA TCGAGGAGGA CCGCGCGCTG CAGGACACCA CCGATGACCT CAGCGGGTTC GCGCCCGACT CGACCGAGCA GCAGGCCGCC GTGGCCGCCG TCGCAGACAC AGACGCCTTC AACTGGGGCT ACGACCCGCT GCACTTCACC GCCCCGGAGG GCTCCTACGC GACCGAGGGC AACCAGGACG GCGGCGCCCG CGTCGCCGAG TTCCGCTCGA TGGTCGGCGG CCTGCACGCG AGCGACCTGC AGGTGGTCCT CGACCAGGTG TTCAACCACA CCGCGGCCAG CGGGCAGTCG GCGAATTCCG TGCTCGACCG TGTGGTCCCC GGCTACTACC AGCGGCTCTC CGCGACAGGC GAGGTCGAGA CCTCGACGTG CTGCGAGAAC GTCGCCACGG AGAACGCCAT GGCCGAGCGC CTCATGGTCG ACTCGGTCGT CACCTGGGCC CGCGACTACA AGGTCGACGG CTTCCGCTTC GACCTCATGG GCCACCACTC CCGCGACACC ATGCTGGCCG TGCGGGCCGG GCTCGACGCC CTGACGCTCG AGAAGGACGG TGTCGACGGG TCCGCGGTGT ACCTCTACGG AGAGGGCTGG AACTTCGGGG AGGTCGCCGA CAACGCGCTC TTCGAGCAGG CCACCCAGGG ACAGCTCGGC GGCACCGGCA TCGGGACCTT CTCCGACCGC CTGCGCGACG CCGTCCACGG CGGCAGCCCC GTCTCGGGGG AGAGCATCTT CCAGCAGGGC TTCGGCACCG GGCTCGGCAC CGACCCGAAC GGCCGACCGA CCAGCACGGC CGACCCGTCG GTCGTCAACG ACGGCTCGGC CGAGGAGTAC GCGAGCCTCG CGCACAGCGC CGACCTCGTC CGCCTCGGCC TCGCCGGCAA CCTGCGCGAC CTCACCTTCG AGACGTCCAC GGGCACCGTC CAGCGCGGTG ACGAGATCGA CTACAACGGC CAGCCGGCCG GGTACGCCGA CTCGCCCGAG GAGGTCGTCA CCTACGTCGA CGCGCACGAC AACGAGACGC TCTTCGACAT CCTCACCCTC AAGCTGCCCG TCGAGACCTC GATGGCCGAC CGGGTGCGGA TGAACACGCT GTCCCTCGCG ACGGCGACCC TCTCGCAGAC ACCGTCGTTC TGGCACGCCG GGACCGACCT GCTGCGCAGC AAGTCGCTCG ACCGGGACAG CTACAACTCG GGTGACCACT TCAACCGGGT GGACTGGACG GGCCAGGAGA GCACCTTCGG CTCGGGCCTG CCGCCCGAGG AGAAGAACGG CGACAAGTGG GACTACATGC GCCCGCTGCT CGCCGACCCG GCGCTCAAGC CCGGACCGGA CGACATGGCC GCGGCGCACG CCGCCGCGAC CGAGCTGCTG GCGCTGCGGT ACTCGACGCC GCTGTTCCGC CTCGGCGAGG CCAGCCTCAT CACCGAGAAG GTCACCTTCC CCGGGTCGGG AGCCGACGCG ACCCCCGGCG TGATCGTCAT GCACGTCGAC GACACCGTGG GCGAGGACGT CGACCCCGCG CTCGACGGGA TGCTCGTCGT CTTCAACGCG AGCCCGGACG CCGTCACCGA GACGCTCGAC GGACTCGTCG GACGTGACCT CGCGCTCTCG ACCGTCCAGG CCGAGGGAGC CGACGCCGTG GTCCGCGAGA CCGCGTGGGA CGCGGCCTCC GGGCAGGTCA CCGTGCCGGC GCGCACGGTC GCGGTCCTCA CCGAGGCGCA GGTCGGCGGC CCGACCGAGC CCACGGAGCC TCCGACGGAG GAGCCGACGG TGCCGCCCAC GGAGGAGCCG ACGGTGTCGC CGACGGACGA GCCGACGGAG CAGCCGACCG ACGGTGCGGG TGACGCCGTC GTCACGCTCT CGGCCGGGAC CGTCCGGGCA GGGGAGAACC TCACCGTCGA CGCCTCCGGC TTCGCGCCGG GGGAGACCGT CCAGGTGTGG CTCAACTCCG AGCCGCAGCT GCTCGTCGCC CGGGCAGCCG GTGACGACGG TGCGCTCTCG GTCCAGGTGA CCGTGCCGCT GAGCACGGCG CCCGGTGACC ACACGGTGCG AGCCGTCGGG CTCGCGTCGG GGATCGACGG GTCCGCGGCG CTCACCGTGC TCGCGGCTGA CGGCAGCGGT GCTGACGGTG ACGGCGCGTC TGGTCCCGTG GGCCAGCTGA GCCTCACGGG AGCCGCGCCG CTCCTGGCCG CGGCCCTGGC GCTGCTGCTG CTGGCGGCGG GGGTGGCCAC GGTCGTCGCG CGTCGCCGCC GGGACGGCGT CGGCTAG
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Protein sequence | MAMLGASLAG VAGTVTAAPS AAEPAAPRLV GSLQTELGCA EDWAPACDAG ALSPTATDGL FSTTVTLPGG DYELKVLAGT TWDDPSWGRA GATGADAANI RLHTAGEAEL EVFFDTETGR TSFVPTADVP EPTEADAPAP VRQPGGDEQF YFVLTDRFAN GDTANDTGYV TVDGVPATDR LEHGFDPTDK GFYHGGDIAG LRQNLDYIEG LGTTAIWLTP SFENRPVQGT GADASAGYHG YWITDFLSID PHLGTNEELD GLIAEAHARD IKVYFDIITN HTADIIDYEE GEYTYRPTTT EPYTPFVPIG LEDVKNPAWL NDPAFYNNRG NSTWAGESVI LGDFDGLDDL DTSQQAVVDG FVDIYQHWAD AGIDGFRIDT VKHVDFSFWE QWTTAIKEAT DNPEFFMFGE VYDADPTKLS PYVRDTDMDS VLDFTYQSAA AAFADGSGPR VLQRLFDGDA YYTTPTKNAH ALPTFLGNHD MGRLGYVVKG REDALQRSEL AHSLMYLTRG QPVVYYGDEQ GFVGSVGDGK DKNSRQSLFD SQVAEFRDQA LLDGSSGAGD HYGTDGALYT HIAGLAALRS AHPALSDGAQ VEQHVAAGAG VYAFSRVDTA ADAPAEYLVA VNNATTESTV ELTALTPDAT FAPLYGTDAT ATSGADGTVA VTVPALGAVV LQAQSPLTAD ADPVAPTFST PVLGQGLEGL QEIAVDLGTE RYAETTISSR VVGASEWELL GTIDDGAPRL FQDVADVPPG TVMEYRAVVR DADDRLTQTV VSASVGDDHG TGAPLPTDGP PPLRDVTVSV AGTMNPAMGC SAAWMPACDD AVLSERAGSV FSGTWTLPAG DYEYKVAIDQ AWTESYGRDG ENVTFTLPAE QEVTFVYDDL THRVAHFFEG SPDGRLAVAA GSFQTHLGCA GDWDPTCLGS WMAPDGDDTY TLTTNRIPAG LYETKTAFGR GWDGALPAQN LGFEVPVDWA TMVFTLDATT GEMTVAADQS VPGDGDRAFW LDARTLALPA AAVPDGGDPA ARTWTLHGAP TGGITVADGV VTTPGGSDLP LTLLPDGVPE DLQARHPLVD GYLAVSLDEA VTDEQVAELL TGELRLTQSG PTGLEYSTGV QVAGVVDDLF TVASDVTLGA TWDGDVPTLA LWAPTARSVT TRVWLDGDGV AAGNPTDVPA ERQADGTWVT QGAAGWKDAA YVYDVEVYVH STGAVEHNVV TDPASVALTL NSEQSVLVDL SDPAYMPSVW ADTPAPVVER DVDRSIYELH VRDFSISDES VPEAERGTYM AFTRESDGMK HLRTLAAAGL NTVHLLPTFD IATIEEDRAL QDTTDDLSGF APDSTEQQAA VAAVADTDAF NWGYDPLHFT APEGSYATEG NQDGGARVAE FRSMVGGLHA SDLQVVLDQV FNHTAASGQS ANSVLDRVVP GYYQRLSATG EVETSTCCEN VATENAMAER LMVDSVVTWA RDYKVDGFRF DLMGHHSRDT MLAVRAGLDA LTLEKDGVDG SAVYLYGEGW NFGEVADNAL FEQATQGQLG GTGIGTFSDR LRDAVHGGSP VSGESIFQQG FGTGLGTDPN GRPTSTADPS VVNDGSAEEY ASLAHSADLV RLGLAGNLRD LTFETSTGTV QRGDEIDYNG QPAGYADSPE EVVTYVDAHD NETLFDILTL KLPVETSMAD RVRMNTLSLA TATLSQTPSF WHAGTDLLRS KSLDRDSYNS GDHFNRVDWT GQESTFGSGL PPEEKNGDKW DYMRPLLADP ALKPGPDDMA AAHAAATELL ALRYSTPLFR LGEASLITEK VTFPGSGADA TPGVIVMHVD DTVGEDVDPA LDGMLVVFNA SPDAVTETLD GLVGRDLALS TVQAEGADAV VRETAWDAAS GQVTVPARTV AVLTEAQVGG PTEPTEPPTE EPTVPPTEEP TVSPTDEPTE QPTDGAGDAV VTLSAGTVRA GENLTVDASG FAPGETVQVW LNSEPQLLVA RAAGDDGALS VQVTVPLSTA PGDHTVRAVG LASGIDGSAA LTVLAADGSG ADGDGASGPV GQLSLTGAAP LLAAALALLL LAAGVATVVA RRRRDGVG
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