Gene Sked_04980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_04980 
Symbol 
ID8632135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp551284 
End bp552393 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content75% 
IMG OID 
Productfolate-binding protein YgfZ 
Protein accessionYP_003313293 
Protein GI269793838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTACT CGAGCCCGCT GCTCTCCCGG CACGGTGCCG TCGCCGGGGC CGGCGTCGAC 
GCCGGTGTCG CCTGGCACTA CGGCGACCCG ACCGCCGAGC AGCGCGCGCT CGAGCGCGGC
GGCGCCTTCG TCGACCTCTC GCACCACGGC GTCGTCACGG TCTCCGGGCC GGACCGGCTG
GGATGGCTCA ACTCCATCAC CTCGCAGCTG CTGCTCGACC TCGGCCCGCG CGACTCCACG
GAGACGCTCG TGCTGTCGCC CCACGGGCAC GTCGAGCACG CCATGTCCGT CGTCGACGAC
GGCGAGACGA CGTGGCTGGT CACCGAGGGG TCGAAGGCCG CCGAGCTCAC CGCGTGGCTC
CAGCGCATGA AGTTCATGAT GCGGGTCGAG ATCACCGACG CGACCGACGC CTGGGCTGTG
ATCGGCGAGC CGGTCGACGC CGAGGGCACG CCCGACGAGA CCGTCACCTG GCGCGACCCG
TGGCCCCGCA CCCGCGAGGG CGGGACGCGG TACGGCCTGC CCGACGACGA GCACCCCGGC
ACCGAGCGCC CCTGGCGCCT GGTCCTGGTC CCGCGCGAGA CCCTCGCCGA GGCTGCCGCG
GCCCGCGAGG CCGCCGGCTG GCGCCTCGCC GGAACGTGGG CGTCGGAGGC GCTGCGCATC
GCCGCCTGGC GACCGCGCCT GGCGACCGAG GTGGACCACA AGACCATCCC GCACGAGCTC
GACTGGCTGC GGACCTCCGT CCACCTGCAC AAGGGCTGCT ACCGCGGGCA GGAGACCGTC
GCGCGGGTGC ACAACATGGG TCGTCCGCCG CGCCGCCTGG TCATGGCGCA CCTCGACGGC
TCCGGGCACC TGCTGCCCGA GGTCGGAGCA GCGGTCGAGG CCGGGGACCG GTCGGTCGGC
ACGGTGACGT CGGTCGCGCG GCACCACGAG CTCGGGCCCG TGGCCCTCGC CGTGGTCAAG
CGCAGCACTC CCACCGACGT CGACCTGCTC GTCGCCTGCG ACGGCGGTGA CGTCGCCGCC
GGCCAGGAGG TCGTGGTCCC GGGCGAGGGC GTCTCGGTCG ACCGCCCGGC CGCCCGCGGC
CCGGTCGCGC GCGGGCTGAA CCCTCGATGA
 
Protein sequence
MTYSSPLLSR HGAVAGAGVD AGVAWHYGDP TAEQRALERG GAFVDLSHHG VVTVSGPDRL 
GWLNSITSQL LLDLGPRDST ETLVLSPHGH VEHAMSVVDD GETTWLVTEG SKAAELTAWL
QRMKFMMRVE ITDATDAWAV IGEPVDAEGT PDETVTWRDP WPRTREGGTR YGLPDDEHPG
TERPWRLVLV PRETLAEAAA AREAAGWRLA GTWASEALRI AAWRPRLATE VDHKTIPHEL
DWLRTSVHLH KGCYRGQETV ARVHNMGRPP RRLVMAHLDG SGHLLPEVGA AVEAGDRSVG
TVTSVARHHE LGPVALAVVK RSTPTDVDLL VACDGGDVAA GQEVVVPGEG VSVDRPAARG
PVARGLNPR