Gene Sked_01850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01850 
Symbol 
ID8631823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp193340 
End bp194647 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content71% 
IMG OID 
Productfamily 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase 
Protein accessionYP_003312990 
Protein GI269793535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCACA TCGCGTTCGT CGGCGCTGGC AGCGTCGTGT TCACCCGTCA GCTCGTGAGC 
GACATCCTCC GGTTCCCCGA GCTCTCCGGC GCCCACCTGT CCCTCCACGA CATCGACCCC
GACCGGCTCG CCGTCGCCGA GGCGTCGACG CGGCGCGTCG CAGCCCAGCT CGGTGCTGAC
GCCCAGGTCA CCGCGTCGAC CGACCGCCGC ACGGCGATCG CCGGCGCTGA CTTCGTCGTC
AACATGATCC AGGTGGGTGG GGTCGACGCG ACCCTGCGCG ACCTCGAGAT CCCGGCCCGG
CACGGGCTGC TCCAGACCAT CGGCGACACC ACCGGCGTCG GCGGGATCTT CCGCGCGCTG
CGCACCTTCC CTGTCATCGA GGCGCTCACC ACCGACATGC GCGAGCTGTG CCCCGAGGCC
TGGCTGCTCA ACTACACCAA CCCGATGGCC ATGAACGTCT GGTGGGCCTC CGTCGTGGCC
CCGGACATCA AGACCGTCGG TCTGTGCCAC AGCGTCTACT GGACCGCGCA CGACCTCGCC
GCCCTCGTCG GGGTCCCCGT CGAGGAGACC CGGTTCCGTG CCGCCGGCAT CAACCACCAG
GCCTGGCTGC TCGAGTGGGA GCACGAGGGC CAGAGCCTCT ACCCGCGGCT CGCCGAGAAG
ATCGCAGGCG ACCCCGAGCT GCAGCGCCGC GTCCGCGTCG AGATGTTCCG CCGGATCGGC
TACTACCCCA CCGAGACCAG CGAGCACTCC TCGGAGTACC TCCCGTGGTT CCTGCGCTCC
CCCGAGCAGA TCGAGCAGTA CCGCCTCACC CCGCTCGAGT ACGCCGACAT CAGCCGCGCC
AACCTCGCCC AGCTCGACGA GACCCGTCGC ATCCTCGCCG CCGACGAGGA CTTCCCCCTC
GAGGAGGGCG CCAGCGAGTA CGCGCCCGTC ATCATCCACT CGATCGTCAC GGGCACGCCG
CGCGAGGTGC ACGTCAACGT GCCGAACGCC GGGCTGATCG ACAACCTGCC CCAGGGCGCG
GTCGTCGAGG TCCCCGCCAC CGTCGACGCC TCGGGGGTGC ACCCCGTCCC GATGGGTGCG
CTCCCGGTGC AGTGCGCGGC GATCAACCAG CCGTACGCCT CCGTCGGCGC CCTGACCGTC
GAGGCAGCGC GGCGAGGCGA CCCTGTGCTG GTGCGGCAGG CAGCGCTGGT CGACCCGAAC
ACGTCGTCGG TGCTCACACC TGCGCAGATC TGGGCCCTCT GCGACGAGCT CGTCGCCGCC
CACGGCGACC TCCTGCCCCC CGCGCTGCGC GTGCAGGTCG GCAGCTGA
 
Protein sequence
MVHIAFVGAG SVVFTRQLVS DILRFPELSG AHLSLHDIDP DRLAVAEAST RRVAAQLGAD 
AQVTASTDRR TAIAGADFVV NMIQVGGVDA TLRDLEIPAR HGLLQTIGDT TGVGGIFRAL
RTFPVIEALT TDMRELCPEA WLLNYTNPMA MNVWWASVVA PDIKTVGLCH SVYWTAHDLA
ALVGVPVEET RFRAAGINHQ AWLLEWEHEG QSLYPRLAEK IAGDPELQRR VRVEMFRRIG
YYPTETSEHS SEYLPWFLRS PEQIEQYRLT PLEYADISRA NLAQLDETRR ILAADEDFPL
EEGASEYAPV IIHSIVTGTP REVHVNVPNA GLIDNLPQGA VVEVPATVDA SGVHPVPMGA
LPVQCAAINQ PYASVGALTV EAARRGDPVL VRQAALVDPN TSSVLTPAQI WALCDELVAA
HGDLLPPALR VQVGS