Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_01720 |
Symbol | |
ID | 8631810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 178837 |
End bp | 180105 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | seryl-tRNA synthetase |
Protein accession | YP_003312978 |
Protein GI | 269793523 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.147645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTTCGCG ACAACCCTGA CCTCGTCCGT GCAAGCCAGG TCGCCCGAGG CGACGACCCG GCCCTCGTCG ACCAGGTGCT CGACGCCGAC TCCCGGCGCC GCAGCGCGCT GACGGAGTTC GAGCAGCTGC GCGCCGAGCA GAAGTCCCTC GGCAAGGAGG TCGCCAAGGC TCAGGGCGAC GAGCGCGCGG CGCTGCTCGC CCGCACCAAG ACCATCGCCG AGCAGGTCAA GGCCCTGCAG GCCGACGCCG ACGACGCCGA CACGACCCTC ACCGAGCTCA GCCGGCAGAT CGCCAACATC GTGGAGGGCG CGCCCGCCGG CGGCGAGGAC GACTACGTCG TGCTCCGCAC CGAGGGCACG ATCCGCGACT TCCAGGCCGA GTACGGCGCC GACTTCGTGC CGCGCGACCA CCTCGACCTC GGCGAGCGCC TCAAGGCCAT CGACACCGAG CGCGGTGCCA AGGTCTCGGG CTCGCGCTTC TACTACCTCA CCGGCATCGG GGCCCGCCTC GAGCTCGCGC TGCTCAACGC CGCGATGGAC CAGGCCTACG CGGCCGGCTT CACGCCGATG ATCACCCCGA CCCTCGTCAA GCCCGAGATC ATGGCGGGCA CCGGGTTCCT CGGCGCGCAC GCCGACGAGA TCTACCGCCT CGAGGCAGAC GACCTCTACC TCACCGGGAC GAGCGAGGTC GCGCTCGCGG GCTACCACTC GAACGAGATC CTCGACCTGT CCGACGGGCC GCAGCGCTAC GCCGGGTGGA GCGCCTGCTA CCGCCGCGAG GCCGGCTCGT ACGGCAAGGA CACCCGCGGG ATCATCCGAG TGCACCAGTT CCACAAGGTC GAGATGTTCA GCTACGTCCC CGTCGAGGAG GCCGACGCCG AGCACGAGCG CCTGCTCGCC TGGGAGGAGC AGATGCTCGC CAAGGCCGAG CTGCCCTACC GCGTGATCGA CACGGCCGCC GGTGACCTCG GCTCGAGCGC CGCCCGCAAG TTCGACTGCG AGGCGTGGCT GCCCACCCAG AACCGGTTCC TCGAGCTCAC CTCGACGTCC AACTGCACCA CCTTCCAGGC GCGTCGCCTG GGCATCCGGG AGCGCACCGC GGCCGGCGAC ACCCGTCCGG TCGCGACGCT CAACGGGACG CTCGGCACCA CGCGCTGGAT CGTCGCGATC CTCGAGAACC ACCAGCAGGC CGACGGCTCG GTCCGCGTGC CTGAGGGCCT GCGCCCGTAC CTGGGCGGCC TCGAGGTCCT CGAGCCGGTC TCGGCATGA
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Protein sequence | MVRDNPDLVR ASQVARGDDP ALVDQVLDAD SRRRSALTEF EQLRAEQKSL GKEVAKAQGD ERAALLARTK TIAEQVKALQ ADADDADTTL TELSRQIANI VEGAPAGGED DYVVLRTEGT IRDFQAEYGA DFVPRDHLDL GERLKAIDTE RGAKVSGSRF YYLTGIGARL ELALLNAAMD QAYAAGFTPM ITPTLVKPEI MAGTGFLGAH ADEIYRLEAD DLYLTGTSEV ALAGYHSNEI LDLSDGPQRY AGWSACYRRE AGSYGKDTRG IIRVHQFHKV EMFSYVPVEE ADAEHERLLA WEEQMLAKAE LPYRVIDTAA GDLGSSAARK FDCEAWLPTQ NRFLELTSTS NCTTFQARRL GIRERTAAGD TRPVATLNGT LGTTRWIVAI LENHQQADGS VRVPEGLRPY LGGLEVLEPV SA
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