Gene Sked_01720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01720 
Symbol 
ID8631810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp178837 
End bp180105 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content71% 
IMG OID 
Productseryl-tRNA synthetase 
Protein accessionYP_003312978 
Protein GI269793523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.147645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTCGCG ACAACCCTGA CCTCGTCCGT GCAAGCCAGG TCGCCCGAGG CGACGACCCG 
GCCCTCGTCG ACCAGGTGCT CGACGCCGAC TCCCGGCGCC GCAGCGCGCT GACGGAGTTC
GAGCAGCTGC GCGCCGAGCA GAAGTCCCTC GGCAAGGAGG TCGCCAAGGC TCAGGGCGAC
GAGCGCGCGG CGCTGCTCGC CCGCACCAAG ACCATCGCCG AGCAGGTCAA GGCCCTGCAG
GCCGACGCCG ACGACGCCGA CACGACCCTC ACCGAGCTCA GCCGGCAGAT CGCCAACATC
GTGGAGGGCG CGCCCGCCGG CGGCGAGGAC GACTACGTCG TGCTCCGCAC CGAGGGCACG
ATCCGCGACT TCCAGGCCGA GTACGGCGCC GACTTCGTGC CGCGCGACCA CCTCGACCTC
GGCGAGCGCC TCAAGGCCAT CGACACCGAG CGCGGTGCCA AGGTCTCGGG CTCGCGCTTC
TACTACCTCA CCGGCATCGG GGCCCGCCTC GAGCTCGCGC TGCTCAACGC CGCGATGGAC
CAGGCCTACG CGGCCGGCTT CACGCCGATG ATCACCCCGA CCCTCGTCAA GCCCGAGATC
ATGGCGGGCA CCGGGTTCCT CGGCGCGCAC GCCGACGAGA TCTACCGCCT CGAGGCAGAC
GACCTCTACC TCACCGGGAC GAGCGAGGTC GCGCTCGCGG GCTACCACTC GAACGAGATC
CTCGACCTGT CCGACGGGCC GCAGCGCTAC GCCGGGTGGA GCGCCTGCTA CCGCCGCGAG
GCCGGCTCGT ACGGCAAGGA CACCCGCGGG ATCATCCGAG TGCACCAGTT CCACAAGGTC
GAGATGTTCA GCTACGTCCC CGTCGAGGAG GCCGACGCCG AGCACGAGCG CCTGCTCGCC
TGGGAGGAGC AGATGCTCGC CAAGGCCGAG CTGCCCTACC GCGTGATCGA CACGGCCGCC
GGTGACCTCG GCTCGAGCGC CGCCCGCAAG TTCGACTGCG AGGCGTGGCT GCCCACCCAG
AACCGGTTCC TCGAGCTCAC CTCGACGTCC AACTGCACCA CCTTCCAGGC GCGTCGCCTG
GGCATCCGGG AGCGCACCGC GGCCGGCGAC ACCCGTCCGG TCGCGACGCT CAACGGGACG
CTCGGCACCA CGCGCTGGAT CGTCGCGATC CTCGAGAACC ACCAGCAGGC CGACGGCTCG
GTCCGCGTGC CTGAGGGCCT GCGCCCGTAC CTGGGCGGCC TCGAGGTCCT CGAGCCGGTC
TCGGCATGA
 
Protein sequence
MVRDNPDLVR ASQVARGDDP ALVDQVLDAD SRRRSALTEF EQLRAEQKSL GKEVAKAQGD 
ERAALLARTK TIAEQVKALQ ADADDADTTL TELSRQIANI VEGAPAGGED DYVVLRTEGT
IRDFQAEYGA DFVPRDHLDL GERLKAIDTE RGAKVSGSRF YYLTGIGARL ELALLNAAMD
QAYAAGFTPM ITPTLVKPEI MAGTGFLGAH ADEIYRLEAD DLYLTGTSEV ALAGYHSNEI
LDLSDGPQRY AGWSACYRRE AGSYGKDTRG IIRVHQFHKV EMFSYVPVEE ADAEHERLLA
WEEQMLAKAE LPYRVIDTAA GDLGSSAARK FDCEAWLPTQ NRFLELTSTS NCTTFQARRL
GIRERTAAGD TRPVATLNGT LGTTRWIVAI LENHQQADGS VRVPEGLRPY LGGLEVLEPV
SA