Gene Sked_00340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00340 
Symbol 
ID8631673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp35100 
End bp35666 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content74% 
IMG OID 
Productprotein-tyrosine-phosphatase 
Protein accessionYP_003312844 
Protein GI269793389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.662786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACT CCTCGCAGAC CAGCACCCCG CCCGCACGCA TCCTGCGGAT CATGACCGTC 
TGCACCGGCA ACATCTGCCG CTCGCCGATG GCCGAGGTCG TGCTGCGCGA CCGGCTCGAG
GCTGCCGGGC TCGCAGGCCG CGTCGTCGTC GACTCGACCG GGGTGAGCTC GGAGGAGCAC
GGCAACCCCA TGGACCGCCG AGCACGCGCC GTGCTGACCG CGGCCGGCTA CACCGACGCC
GCCCTCGACC GGCACTCGGC ACGCCAGGTC GGCGCCGCCG ACCTCGGCGA CCGTGACCTG
CTGCTGCCGA TGACGGCGTC GCACGCCGCC GCGCTGCGCC GCCTCGCCGA GCGCAGCGGC
CAGCCGGACA GTGTTGGCGA CATCGTCATG TTCCGTACCT TCGACCCGGC CGCCCCGGCG
ACGCGCGGGG TGCAGGACGA GCACCTCCTC GACGTCGAGG ACCCCTGGTA CGGCGGTCCG
GCCGACTTCG AGGAGTGCCT CGCGCAGGTC GAGGCGGCCG TCGACGGGGT CGTCGAGTGG
GCCCGCGCCC GGCTCGGGCA CGAGTGA
 
Protein sequence
MTDSSQTSTP PARILRIMTV CTGNICRSPM AEVVLRDRLE AAGLAGRVVV DSTGVSSEEH 
GNPMDRRARA VLTAAGYTDA ALDRHSARQV GAADLGDRDL LLPMTASHAA ALRRLAERSG
QPDSVGDIVM FRTFDPAAPA TRGVQDEHLL DVEDPWYGGP ADFEECLAQV EAAVDGVVEW
ARARLGHE