Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3723 |
Symbol | |
ID | 8599169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 3952552 |
End bp | 3953115 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003310488 |
Protein GI | 269122311 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000134359 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGTGTTA ATACCAAAGA AAAAATTTTA TCTGCCGCAG AAAAATTATT CATGGAAAAT GATCATGAGG ATGTTTCTGT CAGAAGAATA TGTGCAGCAG CCGGAGTTTC TAACGGCTCA TTTTATCATC ATATAGGGTC AAAAGAAAAT CTTATCAAAA TGATTTACTA TTCTTCTGAT GAAATGGGAA TAAAAATTTT CCTGCAAAAA AGTAAAAATA AAAATATTTT TGAAAAAATA GAATTAATCG CTGATATTTA TACAGATTTT GCTTTAAAAT ACGGGCCCAA ATTTTGCAAA CATATTATTT ATCTGAAACT AAGCGATCAC TTCATTGATT CGGAAACTTA TTTATTAGGC TCTCAGATGA AATTGCTTAT TAAGGATGCT TATTCTAATA ATTATTTTAA TAATGAATAT ACCGAGAATT TTATTCTTTC TGTTTTTCTT ACTACCATAA GAGGTTTTGC TTATGAATGG AGTACACAGA ACGGAGAAGG CGATCTAAAA AAATACACCT TATCCGCAAT AAAAATTCTG ATCAATCAAT TTAAAAATAT TTAG
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Protein sequence | MGVNTKEKIL SAAEKLFMEN DHEDVSVRRI CAAAGVSNGS FYHHIGSKEN LIKMIYYSSD EMGIKIFLQK SKNKNIFEKI ELIADIYTDF ALKYGPKFCK HIIYLKLSDH FIDSETYLLG SQMKLLIKDA YSNNYFNNEY TENFILSVFL TTIRGFAYEW STQNGEGDLK KYTLSAIKIL INQFKNI
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