Gene Sterm_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0039 
Symbol 
ID8595538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand+ 
Start bp47513 
End bp48256 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content32% 
IMG OID 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_003306858 
Protein GI269118681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000112771 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA AAAGAATAGA CAGAATACTT CAGATGATAA AACTAAATAA TGCAGTGGGT 
ACAGGAGAAC TTGCCAAGAC ATTAAATGTA GCGGAAAGTA CAGTAAGGCG GGATCTTAAC 
CAGCTTGAAA AAATAGGGCT GTTAAAAAAA GTCCATGGCG GAGCAGTAAA GCTTGAGAAT 
CAGGTTATAT TTGAAATGTC CTATTCAGAA AGAGAAGAGC TTAACTTAAA GCTGAAAGAA 
CAGGTTGCCA AAAAAGCAGC AGGATACATA AATGACAATG ATACAATTTT CATCGGACCG 
GGAACTACAA CAGAGATGGT TCTAAAATAT ATAAAAACTA AAAATAATAC AATTATCACC 
AATTCATTAA GTGCTTTTTC AAAATATTCC TCACTTCCGT ATAAACTGAT AATTGCTCCC 
GGTTATCTAA GAACAGAAAC CAGTGCAGTA ATAGGAACCT TTACAAATAA TTTTCTAAAA 
AAAATAAATG TGGATATAGC CTTTTCAGGT GCAAACTGTA TTAATGACAG CCAGCTTATG 
TCTTCAAATG AGGAAGAGGG GACAGCACAG GAAATAATAC TTAATAATGC CAAAAAAAGA 
TTCCTGCTTG TAGACAGCAC AAAGTTTGAA ACAAAATCAT TTTTTACGTT CTATTCTGCG 
GAAAATCTTG ATGCAATAAT AACAGATAAC GAAATAAACA GCAAAATAAA AAATAAGTAT 
AAAAAATTTT GTAAAGTATT ATAA
 
Protein sequence
MKEKRIDRIL QMIKLNNAVG TGELAKTLNV AESTVRRDLN QLEKIGLLKK VHGGAVKLEN 
QVIFEMSYSE REELNLKLKE QVAKKAAGYI NDNDTIFIGP GTTTEMVLKY IKTKNNTIIT 
NSLSAFSKYS SLPYKLIIAP GYLRTETSAV IGTFTNNFLK KINVDIAFSG ANCINDSQLM 
SSNEEEGTAQ EIILNNAKKR FLLVDSTKFE TKSFFTFYSA ENLDAIITDN EINSKIKNKY 
KKFCKVL