Gene Rmar_R0009 details

Gene Information

• Locus tag: Rmar_R0009
• ID: 8566807
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 189201
• End bp: 192161
• Gene Length: 2961 bp
• GC content: 61%
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.609775
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTAAGTAGGT AAGGGCGCAT GGTGGATGCC TCGGCATGGG CAGGCGATGA AGGGCGTGGC 
AAGCTGCGAT AAGCCGCGGG GAGCCGCAAG CAGGCTGTGA TCCGCGGATT CCCGAATGGG 
GCAACCCGGC CGGTCGAAGA CCGGTCATCC ACGGGCTGAA TCCATAGGCC CGTGGAGGCG 
AACCCGGGGA ACTGAAACAT CTCAGTACCC GGAGGAAAAG AAAGCAACCG CGATTCCCTG 
AGTAGTGGCG AGCGAAAGGG GAACAGCCCA AACCGGCGTC GTTTCGGCGG CGCCGGGGTT 
GTAGGGCCCG CCATATGGGA TCGGAAGGTG AAGTCGAAGC GTGCTGGAAA GCCGCGCCAT 
AGAGGGTGAT AGCCCCGTAG GCGTAAGCCG ACCGATCTCG GCGGTGTCCC TGAGTACCAC 
GGGACCGGTG GAATCCTGTG GGAAGCTGCC AGCACCATCT GGCAAGGCTA AATACTCGCC 
CATGACCGAT AGCGCACTAG TACCGTGAGG GAAAGGTGAA AAGAACGCCT AGTAGGCGAG 
TGAAAAGGAC CTGAAACCAT GCGCCTACAA CCAGTCGGAG CCTCTTGCCG GACCAAAGTC 
CGGCAATGGG GTGACGGCGT GCCTTTTGCA GAATGAGCCT ACGAGTTGCT CCTCTCTGGC 
AGGCTAAGTG CCTCAGGCAC GGAGCCGCAG CGAAAGCGAG TCCGAACAGG GCGCCAGAGT 
CAGAGGGGGC AGACGCGAAA CCGGGTGAGC TACCCTTGGC CAGGTTGAAG CGTGGGTAAG 
ACCACGTGGA GGACCGAACC GGTTGGCGTT GAAAAGCCAT CGGATGAGCT GAGGGTAGGG 
GTGAAAGGCC AACCAAACCC GGAGATAGCT CGTACTCCCC GAAATGCATA GAGGTGCAGC 
GTCGCAGCCG AGTGTGCGGG AGGTAGAGCA CTGGTTGGGC TAGGGCCCTT CACCGGGTAC 
CAAACCCAGT CAAACTCCGA ATGCCCGCAC ATGCTCTGCG GCAGTGAGGG CATGGGCGAT 
AAGGTCCATG TCCGAGAGGG GGACAACCCA GACCGACAGC TAAGGCCCCC AAGTCCAGGC 
TAAGTTGGGC AAAGGAGGTC GGGCTGCTAA GACAACCAGG AGGTTGGCTT AGAAGCAGCC 
ATTCCTTTAA AGAGTGCGTA ACAGCTCACT GGTCGAGCGG CCCGGCGCCG AAAATTGTCG 
GGCATCAAGC CTGGCGCCGA AGCTTCGGGT TTGCAGCCTT CGGGCTGCAA GCGGTAGGGG 
AGCATTCCAG TTGCGCTGAA GTCGCCTCGT GAGGGGCGGT GGAGCGACTG GAAAAGAAAA 
TGTAGGCATG AGTAACGAGA AGACGGGTGA AAAACCCGTC CGCCGTAAGC CCAAGGGTTC 
CTGCTCAACG CTAATCGGAG CAGGGTTAGC CGGGTCCTAA GCCGAGGCCG AAAGGCGTAG 
GCGATGGGAA ACGGGTTAAT ATTCCCGTGC CACCCGAAGG CGCTAACCTG AGGCGTGACG 
CAGGAGCGTA AGGCCCGCGC CCTGACGGAA TAGGGCGTTG AAGCCCGTAG GCTGGGTGGT 
AGGCAAATCC GCCACCCGCT AAGGCCGAAA GGCGACAGTA GGGGGACCCG CAAGGGAAAC 
CCATAGAGGC CCCAAGCACA CTGCCAAGAA AAGCGTCGCA GGTTGTCTTC GGGTGCCCGT 
ACCGGAAACC GACACAGGTG GGCGAGGCGA GTATCCTCAG GCGCTCGAGT GATCCGTGGC 
TAAGGAACTC GGCAAATTGG CCCCGTAACT TCGGGAGAAG GGGCGCCTCC TCCCATCCAA 
AAGCGGGAGG GGGCCGCAGT GACCAGGCCC AGGCGACTGT TTAACAAAAA CACAGCTCTC 
TGCGAACTCG TAAGAGGACG TATAGGGAGT GACACCTGCC CGGTGCCGGA AGGTTAAGGA 
AGGGGGTTAT CTCGGCCTCG TGCCGGGAGA AGCTCCCGAC CGAAGCCCCG GTAAACGGCG 
GCCGTAACTA TAACGGTCCT AAGGTAGCGA AATTCCTTGT CGGGTAAGTT CCGACCTGCA 
CGAATGGTGT AACGACCTGG GCACTGTCTC GGCCACGGGC TCGGTGAAAT TGTGGTGCCA 
GTGAAGACGC TGGCTACCCG CCGCGGGACG GAAAGACCCC GTGCACCTTT ACTGCAGCCT 
GGCATTGACG CCGGCCAGGG CGTGTGCAGG ATAGGCGGGA GGCTGTGAAG CCGGGGCGCC 
AGCTCCGGTG GAGCCGCCCT TGAGATACCG CCCTCGCTCT GGCTGGCGCC TAACCCACGG 
CCGTTATCCG GTCGGGGGAC AGTGTCAGGT GGGTGGTTTG ACTGGGGCGG TCGCCTCCTA 
AAGAGTAACG GAGGCTCCCA AAGGTCCCCT CAGCACGGTC GGTAATCGTG CGTAGAGTGC 
AAGGGCATAA GGGGGCTTGA CTGCGAGACT CACAAGTCGA GCAGGGGCGA AAGCCGGGCC 
TAGTGATCCG GCGGTTCCGA ATGGAAGGGC CGTCGCTCAA AGGATAAAAG GTACGCCGGG 
GATAACAGGC TGATCGGGGC CAAGAGTTCA CATCGACGCC CCGGTTTGGC ACCTCGATGT 
CGGCTCATCG CATCCTGGGG CTGGAGAAGG TCCCAAGGGT TGGGCTGTTC GCCCATTAAA 
GCGGTACGTG AGCTGGGTTC AGAACGTCGT GAGACAGTTC GGTCCCTATC TGCGGCGGGC 
GCAGGAGGCT TGAGCGGAGC TGCCCCTAGT ACGAGAGGAC CGGGGTGGAC GGACCTCTAG 
TGTACCAGTT GTGCCGCCAG GTGCACCGCT GGGTAGCTAT GTCCGGAAGG GATAAGCGCT 
GAAAGCATCT AAGCGCGAAG CCCACCGCAA GATGAGGCCT CCCCTGCGGG CCGTCCGAGA 
CCAGGACGTC GATAGGCGGC AGGTGTAAGC GGGGTAACCC GTTGAGCCGA GCCGTACTAA 
TCGCCCGCGT GACTTAATCC C 

 

Protein sequence