Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1309 |
Symbol | |
ID | 8567959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1535216 |
End bp | 1537990 |
Gene Length | 2775 bp |
Protein Length | 924 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | translation initiation factor IF-2 |
Protein accession | YP_003290587 |
Protein GI | 268316868 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0121044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA AGTTCAAAAT CCGGCTGTTC AAGCTAGCGC GTGAGCTGAA CGTCGGGATC GATACCATCG AGCAGCAGCT CGGAGAGCTG GGCTATGCCC ATGCGCTTTC CGGAAAAGGG GCCAATGCCG TCCTGGAGGA CGAAGACGCC TACGAGGCGC TGCTGGAGGC GTTTGCCCAC GACCGGAAGG TGGCGGCCCG GCTGAAAGAA TTGCGCGAGG CGCGCGAGGC GGCCGCCCGG GCAGCGAAGG CGGAGGCAGA GGCGGCCGAG GCCGTCGAAG AAGTCGAAGA GGAAGCCGTT GAAGAAGTGC CGGCTTCAGC GTCGGCCGCC GAAGAGACCG AGCAGGAAGC TGCGGAAACG GCCGTCGAAG AAGCCACCGG GGAGCCGGAG GTTGAAGCGC CTGCTGCGTC TGATGAAGCG GTGGAGGCGG AGGAGGTCGC CGAGGAGGTC TCGGCCGAGC CCACACCTGC CCCTGAGCAG GAAGAAGAAG TGGAGGCGGT GGCAACAGCG GCTGCGACGG AGGAATCCGA GGCGGAGGTC GAGGCATCTG AGCCCGAAAC GCCTGCGGCG GCCGAAGCCG AAGCGGCTCC GACGGAAGAG GCCCCTGAGT CCGCTGCGGA AGAAAAGAAA GAAGAGGACG AGGTGATCCG GGCGCAGGTG GTGCTCCAGG GGGCCAAGGT CGTCGGCAAA ATCGACCTGT CGAAAGTCGA AGACGACGAT ACGCGGTCCG GTAAGCGCAA ACGCAAACGC AAACGCAAAG CGAAGCCTGC GCCAGACGAA GAAGTGGTCA AAGTAGCCGT CGAGGACGAG GAGGAGGAAA AAACACGAAG CAAACGCAAA CGCAAGCGCA AGCGGATTCG CCGCGTCGAC GAGGAGGAAG TCGAACAGTC GCTGCAGGAG ACGCTTCGTG AGCTGGAGCA GGGCGTCAGC CGCATACGTC AGCGCCGGCG CCGTGAACGG CGTGAACGTC ATGCGCAGGA ACGGGAACGG GAGGCATTGC GGGAAGCGCA GGAAGCCCGC AAACTCCGGG TGACGGAGTA TATCTCGGTG GGTGAGCTGG CCGAGTTGAT GGGGGTCGAG GTCAGCGAAG TGATCTCGAC GCTCTTCAAT GCGGGGATGA TCGTCTCCAT CAACCAGCGG CTCGACGCCG ACACGATCCA GTTCGTGGCC GATGAATTCG GCTACGAGGT CGAATTCATC ACCGACTACA ACGAGCTGGA GATAGAAATC CCGGAGGATC GACCGGAAGA TCTGCAGCCG CGGGCACCCA TCGTCACGGT GATGGGGCAC GTCGATCACG GCAAGACATC GCTTCTGGAC TACATCCGCA AGACGAACGT GGTGGCCGGC GAGGCCGGGG GCATCACGCA GCACATCGGC GCCTACCACG TGGAGCTGCC GGACGGTCGG TACATCACCT TCCTGGACAC GCCGGGGCAC GAAGCCTTCA CGGCCATGCG TGCCCGCGGC GCCAAGGTGA CGGACATCGT GATCCTGGTG GTGGCGGCCG ACGACGGCGT GATGCCGCAG ACGATCGAGG CCATCAACCA CGCCAAAGCG GCCGGCGTGC CCATCGTGGT GGCCGTCACC AAGATCGACA AACCCGAGGC CAATCCGCAG CGCGTCCTCC AGCAACTGGC CGAGCACGGC GTGCTGGTCG AGCAGTACGG CGGTCAGGTG CAGTGCGCCT TCGTTTCGGC CAAGACCGGC GAGGGGGTCG ATGACCTGCT CGAAAAGGTC CTGCTGGAGG CCGAGTTGCA CGATCTGAAG GCGAACCCGA ACCGCCCGGC CGTCGGCACC ATCATCGAAA GTCGCGTGGA GAAAGGACGC GGCAACGTGG CCACCGTGCT GGTGCAGAAC GGGACGCTCC GCGTGGGCGA CCCCTTCGTG GCCGGCGTGA CGAGTGGCCG CGTGCGGGCG ATGTTCGACG AGCGGGGCAA CCGCGTCGAG GCTGCCGGAC CCTCCATTCC GGTGCTGGTG CTCGGCTTCG ACGAACTGCC CGAAGTTGGC GACCAGTTCG TGGTCGTGCC CGACGAAAAA GAAGCAAGGG CGATCGCCCA GAAGCGTCAG CAGATCCGCC GTGAGCAGAT GCTGCGCAAG CAGCGTCGCA TCTCGCTCGA CGAGATCAGC CGGCGCATGG CGCAGGGCGA GCGCCTGAAG GAGCTCAACC TGATCATCAA AGGTGATGTG GCCGGTTCGG TCGAGGCGCT GAGCGACGCG CTCCTGAAGC TCTCGACCGA CGAGGTGGCC GTGAACATCA TCCACAGCGG CGTCGGCGCC ATCACCGAAA GCGACGTGAT GCTGGCTTCG GCCTCCGACG CCATCATCAT CGGCTTCCAG GTGCGTCCCA CCAGTAGCGC CCGCCAGCTG GCCGAGCGTG AGCACGTGGA CATCCGGCTC TACTCGGTCA TCTACCAGGC CATCGAAGAC GTGCGCGATG CCCTGGAGGG ACTGCTGTCG CCCGAAAAGA CCGAGCAGAT TGTGGGGGTG GCCGAGGTGC GCGAGACGTT CAAGATCCCG AAGGTCGGTA CGGTGGCCGG CTGTCGGGTC CTCGAAGGGC GTATTCGCCG GGGCGACCGC GTGCGCGTCA TCCGCGACGG CGTGGTCATC TACGAAGGCG CGATCTCGTC GCTCAAACGC TTCAAGGAGG ACGTGCGAGA GGTGCAGAGC GGCTACGAGT GCGGCATGGG TATCGAAAAC TTCAACGACA TCAAGGTGGG CGACCAGATC GAGGCCTTTG AGATCGTCGA ACAGCGGCGC AAACTGGAGG TCTGA
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Protein sequence | MAKKFKIRLF KLARELNVGI DTIEQQLGEL GYAHALSGKG ANAVLEDEDA YEALLEAFAH DRKVAARLKE LREAREAAAR AAKAEAEAAE AVEEVEEEAV EEVPASASAA EETEQEAAET AVEEATGEPE VEAPAASDEA VEAEEVAEEV SAEPTPAPEQ EEEVEAVATA AATEESEAEV EASEPETPAA AEAEAAPTEE APESAAEEKK EEDEVIRAQV VLQGAKVVGK IDLSKVEDDD TRSGKRKRKR KRKAKPAPDE EVVKVAVEDE EEEKTRSKRK RKRKRIRRVD EEEVEQSLQE TLRELEQGVS RIRQRRRRER RERHAQERER EALREAQEAR KLRVTEYISV GELAELMGVE VSEVISTLFN AGMIVSINQR LDADTIQFVA DEFGYEVEFI TDYNELEIEI PEDRPEDLQP RAPIVTVMGH VDHGKTSLLD YIRKTNVVAG EAGGITQHIG AYHVELPDGR YITFLDTPGH EAFTAMRARG AKVTDIVILV VAADDGVMPQ TIEAINHAKA AGVPIVVAVT KIDKPEANPQ RVLQQLAEHG VLVEQYGGQV QCAFVSAKTG EGVDDLLEKV LLEAELHDLK ANPNRPAVGT IIESRVEKGR GNVATVLVQN GTLRVGDPFV AGVTSGRVRA MFDERGNRVE AAGPSIPVLV LGFDELPEVG DQFVVVPDEK EARAIAQKRQ QIRREQMLRK QRRISLDEIS RRMAQGERLK ELNLIIKGDV AGSVEALSDA LLKLSTDEVA VNIIHSGVGA ITESDVMLAS ASDAIIIGFQ VRPTSSARQL AEREHVDIRL YSVIYQAIED VRDALEGLLS PEKTEQIVGV AEVRETFKIP KVGTVAGCRV LEGRIRRGDR VRVIRDGVVI YEGAISSLKR FKEDVREVQS GYECGMGIEN FNDIKVGDQI EAFEIVEQRR KLEV
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