Gene Rmar_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1038 
Symbol 
ID8567679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1186574 
End bp1187407 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content65% 
IMG OID 
Productthioredoxin 
Protein accessionYP_003290319 
Protein GI268316600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGGTA CGAACGCAGC CGTTTACGAA GTAACGGATT TTCAGCGAGA CGTTCTGGAA 
GCCAGCTACC GGATACCCGT CCTGGTGGAT TTCTGGGCGC CCTGGTGCGG CCCCTGCCAG
ATTCTGGGCC CCGTGCTGGA GCGCCTGGCG CAGAAATACG CCGGCAAGTG GAAGCTGGTG
AAGGTCAACA CGGACGAACA TCCGGAGCTG GCCATGCAGT ACGGCGTCCG GGGCATCCCG
GCCGTGAAGC TGTTCGTGAA CGGCGAGGTC GTGGGCGAGT TCGTGGGCGC CCTGCCGGAG
TACGCCATCG AGCAGTGGCT GGCCGAGGTG CTTCCGGACG AAAATCGGGC GCAGCTGGAG
CAGATCGAAC AGCTCCTGGA CGAAGGGAAG CTGGCCGAGG CTGAACCGCT GCTCCGGAAG
CTGCTGACGG CCGATCCCGG CAACGACAAA GCGCGTGTGC TGCTGGCCCG CATCCGGGTT
TTTGACGATC CGGACGAAGC GGAGCGGCTG CTGGAGAACC TGGACATCGC CGAAGCCGCC
TACCTGCAGC AGATCGAAGG CATTCGCACC ATCGCCCGGC TGCTTCGCCT GAAGGATCAA
CCCGAATCGT TGCCGGAAGG CCCCGGACGC GACTTCTACC GCCAGGCCAT CGAAGCGCTG
GCCCGCAAGG ACTTCGACAC GGCCGTCGAG CGGCTGATCG ACGTGCTCCG CAAAGACCGC
TACTATGACG ACGACGGGGC CCGCAAGGCC GGTGTGGCGA TCTTCACGCT GCTGGGCGCG
CGCCATCCGG TCACGCAGCG CTGGCGCCGG ACGTTCGACA TGTGGCTCTA CTGA
 
Protein sequence
MQGTNAAVYE VTDFQRDVLE ASYRIPVLVD FWAPWCGPCQ ILGPVLERLA QKYAGKWKLV 
KVNTDEHPEL AMQYGVRGIP AVKLFVNGEV VGEFVGALPE YAIEQWLAEV LPDENRAQLE
QIEQLLDEGK LAEAEPLLRK LLTADPGNDK ARVLLARIRV FDDPDEAERL LENLDIAEAA
YLQQIEGIRT IARLLRLKDQ PESLPEGPGR DFYRQAIEAL ARKDFDTAVE RLIDVLRKDR
YYDDDGARKA GVAIFTLLGA RHPVTQRWRR TFDMWLY