| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0988 |
|---|
| Symbol | |
|---|
| ID | 8567628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1122803 |
|---|
| End bp | 1124263 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003290270 |
|---|
| Protein GI | 268316551 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.638134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCT GGCGCGGCTC GGTCTTCGGC CGCGTGGCCG CACTCCTGAT CGGCGCGCAG
GTGCTGGTGG CGCTGCTGGC CGTCGGGCTG AGTGCCTACT TTGCCCAGAC GCGAAGCCGG
GAGCTGGCCG CTTCGGGCAT CCGGCTCCGG CTCGACGCCC TGGCTGAAGA GATCGAACGT
CGGGCCGATC TGACGACGGA CGATCTGGCC ACGCTACCCC TTCCGCTGCA ACTGGACCTG
AGGGCCCGCT TTCCGGATCC CGTCTGGCTG GTCGATACGC TGGGAAAGCC CGTCTTTGTC
GCCCGGCCCG ACTCGGAACT GTTCGGGCCA TATCCGGAAA TGCCCCGCGT GCTGCCCGCC
GAGCTGCGTC CCTGGCTTCG TCGGGATACG CTGGTGGTGC ATCTGGAAGG CGACGGCTGG
GGGATGGCTC CGCTGTACGA TCTGGGAGGA CAGCGGGTAG GGGCCGTGGT GGTGTATCCG
CTCCGGCGGT CGCTGGCCCG CGAGCTGGCC GGCACGCAGC AGGCCTACTA TCGGGCGCTG
GCCGTCACGC TGGGCGCGGC CGTGCTGCTG GCGCTGCTGC TGGGGGCGTT TTTTACCCGC
CAGCTGGTGC GGCCGCTCCG CCGGGTGGTC GCCCAGGTGC AGCGCATCCA GGCGGGCGAC
TGGGAGGCGC GGCTTCCGGT GGCGCGCGAC GATGAATTCG GGCGTCTAGC CCGCGCGGTG
AACGAAATGG CGCAGGCCGT GGCCCGGAGC ATCCGGTCGC TGGAAGAGAC CGACCGCATG
CGGCGGGAGC TGATGGCCGG GATCGGGCAC GACCTGCGCA CGCCGCTGGC CGCCCTGCTG
GGTTATGCCG AAGAGGCCCG CCGACTCCTG CAACAGGGCA ACACTGAGGC CGCCGTCGAA
GCGCTGGCCG TGGTGGAGGA GCGCGGGCGA CACCTGCAAC GACTGGTCGA AGCGCTCTTC
GAACTCAGCC TGCTGGAGCG TCCCGAACCA CCCCTGCAAC TGGAGCCCGT ACCGCTGGGG
GAACTGCTGG ACGAGACTTT TCGGGCGCAC CGGCGCCTGT TTCAGGACGC GGGCCTGACG
CTGCAGGCCG ACTGGCCTCT GGCGCTGCCC GTGGTGGAAG CCGACGGCGC CCGGTTGCGC
CGCGTGCTCG ACAACCTGCT CGACAATGCC CGCCGGCACA CACCCGCCGG GGGCACCGTC
TGGCTGGGCG CGCGGGCGAC CGAAACCGAG GTGCATATCT GGGTGCAGGA CACTGGCCCC
GGCCTCTCGC CCGAGCAGCA GGCCCGATTG TTTGAACCTT ACGGGCGACA GAAAAGCGGT
GCTTCCCGCG GGCTGGGGCT GCTCATCAGT CAGGCCATCG CCCGCGCGCA CGGCGGCCGT
CTGGAAGTAA CCAGCGCGCC CGGACAGGGC AGCACCTTCA CGCTGATCCT GCCCCGGCGC
GAGGTGCAGT TCGACGACTG A
|
|---|
| Protein sequence | MSSWRGSVFG RVAALLIGAQ VLVALLAVGL SAYFAQTRSR ELAASGIRLR LDALAEEIER
RADLTTDDLA TLPLPLQLDL RARFPDPVWL VDTLGKPVFV ARPDSELFGP YPEMPRVLPA
ELRPWLRRDT LVVHLEGDGW GMAPLYDLGG QRVGAVVVYP LRRSLARELA GTQQAYYRAL
AVTLGAAVLL ALLLGAFFTR QLVRPLRRVV AQVQRIQAGD WEARLPVARD DEFGRLARAV
NEMAQAVARS IRSLEETDRM RRELMAGIGH DLRTPLAALL GYAEEARRLL QQGNTEAAVE
ALAVVEERGR HLQRLVEALF ELSLLERPEP PLQLEPVPLG ELLDETFRAH RRLFQDAGLT
LQADWPLALP VVEADGARLR RVLDNLLDNA RRHTPAGGTV WLGARATETE VHIWVQDTGP
GLSPEQQARL FEPYGRQKSG ASRGLGLLIS QAIARAHGGR LEVTSAPGQG STFTLILPRR
EVQFDD
|
|---|
| |