Gene Rmar_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0956 
Symbol 
ID8567595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1089348 
End bp1090661 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content64% 
IMG OID 
Productsodium:dicarboxylate symporter 
Protein accessionYP_003290238 
Protein GI268316519 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTGGT ATCGTAAACT GCACTGGCAG ATTCTGATCG GGCTGCTGCT GGGTCTGCTT 
TTCGGCCTGC TGGCCGCGGC GCAGGGATGG AGCGGGTTTG TGACGCGCTG GGTGGCACCG
TTCGGGACGA TTTTCATCAA CCTGCTGAAG CTGATCGCCG TCCCGCTTGT GCTGGCCTCG
CTGATCGTGG GCGTGACGTC ACTTTCGGAC CTGAAGCGCC TCTCCCGCAT CGGGGGCAAG
ACGATCGCCA TCTACATTGC CACGACGGCC GTGGCCATCA CGATCGGTCT GGTGATCGTG
AACGTGTTGC GGCCCGGCCA CACCGTGCCG CCCGAGATGC GGACGCGCCT GCAGGAAGCG
TACGAGGCCG ACGTCGAGGC GCGGGCCGAG CTGGCCGAGC AGACGCGCCA GCGGGGACCG
CTCCAGGTGC TCGTGGACAT CGTGCCCGAG AACGTCTTCA GTGCGGCCTC GGACAACCGC
AACATGTTGC AGGTGGTCTT CATCGCGCTG TTTGCCGGGA TCGGGCTGCT GCTCATTCCC
GCCGACAAAG CCCGGCCGGT GATCGCCTTT TTCGACGGGG TCAACGCGCT GGTCATCCAA
CTGGTCGAGC TCATCATGCG TATCGCCCCG ATCGGGGTCT TCGCGTTGCT GGCCGACACG
ATCACGTCTA TTGCCCGCGA CAACCTGCAA CAGGTCTTCG AACTGCTGGC CGCGCTGGGC
TACTACAGCC TGGCGGTGGT GCTGGGGCTG GTGATCCACA CGCTGGGAAC TTACCCGCTG
CTGCTCAAGC TACTGGCCCG CGTGCCGCTG AAAACGTTCT TTTCCGGCAT CGCGCCGGCG
CAGCTTGTGG CTTTCTCTAC TTCGTCAAGC GGGGCCACGC TGCCGGTAAC GATGGAATGT
GCCGAGAAGA ACCTGGGCGT ATCGGAGGAA GTCTCGTCGT TCGTGCTGCC GCTGGGCGCC
ACCATCAACA TGGACGGCAC AGCGCTCTAT CAGGCCGTGG CGGCCGTGTT CATCGCGCAG
ACACTGGGAC TCGGGCTGGA TCTGGGCGCG CAGCTCACGA TTCTGCTGAC GGCCGTCCTG
GCTTCGATCG GCACGGCGGC CGTTCCCAGT GCGGGCATCG TGATGCTGGT GATCATCCTG
GAGTCGGTCG GCGTGCCCAG CGCGGGCATT GCGCTGATTC TGGGCGTGGA CCGCATTCTG
GACATGTGCC GGACCGTGAC GAACGTCACG GGAGATCTGA CGGTGGCCAC GATCGTGGCA
GCTACGGAAG GACAACTGGC GTTGCCGGTA CCGGAAACGA AAAGCGCCTC CTGA
 
Protein sequence
MPWYRKLHWQ ILIGLLLGLL FGLLAAAQGW SGFVTRWVAP FGTIFINLLK LIAVPLVLAS 
LIVGVTSLSD LKRLSRIGGK TIAIYIATTA VAITIGLVIV NVLRPGHTVP PEMRTRLQEA
YEADVEARAE LAEQTRQRGP LQVLVDIVPE NVFSAASDNR NMLQVVFIAL FAGIGLLLIP
ADKARPVIAF FDGVNALVIQ LVELIMRIAP IGVFALLADT ITSIARDNLQ QVFELLAALG
YYSLAVVLGL VIHTLGTYPL LLKLLARVPL KTFFSGIAPA QLVAFSTSSS GATLPVTMEC
AEKNLGVSEE VSSFVLPLGA TINMDGTALY QAVAAVFIAQ TLGLGLDLGA QLTILLTAVL
ASIGTAAVPS AGIVMLVIIL ESVGVPSAGI ALILGVDRIL DMCRTVTNVT GDLTVATIVA
ATEGQLALPV PETKSAS