| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0687 |
|---|
| Symbol | |
|---|
| ID | 8567324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 787456 |
|---|
| End bp | 790656 |
|---|
| Gene Length | 3201 bp |
|---|
| Protein Length | 1066 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | TonB-dependent receptor plug |
|---|
| Protein accession | YP_003289973 |
|---|
| Protein GI | 268316254 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000368549 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAACG ACTGGTACAA TGTCTGGCGG AACGGCTGGA AGCGATTCGG CTTCTGGTTG
GTGCATGTCT GGCTGCTCAC AGCAAGCGCT TCGATAGCCC AAGCGCAGAC GGGAGCGGTT
ACGGGACGCG TGACAGATGC CGACACAGGC GAACCGCTTC CCGGTGTGAA TGTGGTGGTG
GAAGAACTGG CGACCGGAGC GGCCACCGAT GTGGAAGGAC GGTATACGAT CTCCGGACTG
CGGCCGGGTA CCTACACGCT GCGGGCCTCG TTTGTGGGCT ATGAAGACCA GACGCAAGCG
GTTGCGGTGC GTGCCGGAGA GACGGTGGAG GTGAATTTTG CCCTGCAGCC CACGACCCTG
GGCTTGCAGG AGGTGGTCGT GGTGGGGTAT GGCACGCAGC GGTGGGAGGA TGTGACGGGT
TCGGTGGCGG CAGTCCGTAC GGAAAACCTG GCGTTGATGC CCGTGACGGG GCCCGATCAA
GCGCTGGCCG GTCAGGTGGC CGGGGTGCAG GTGCTGCAGG GGAGCGGCAT CCCCGGTGGT
GGTCCACAGA TTCAGGTGCG TGGTGTCGGT GCGATCGGCG CGGGAAATCA ACCGCTTTTC
GTGGTGGACG GCTTCCCGCT TCCCAGCTCG ACCAATGAAA TTCGCAATCC GCTCAACGAC
ATTCCCCCCG AAGACATCGA ATCGATTACA ATCCTGAAGG ACGCTTCGGC GGCAGCAATT
TACGGCTCCC GGGCGGCCAA CGGCGTGGTG ATCATTACGA CAAAGAGCGG GCGGGGACAG
CGGCCTACCG TAACGATCAC CTCTTCGATC GGCGTGCAGC AGATCCCGCC GGAGCGCAAG
CCGGACATCA TGAGTGCCCG GGAGTTTGCC CAGTGGATGA AGGAGCGCTA CGAGGATCAC
GTGCGGATCG ACCTGGGCCG GGAGCCAACC CCGGATGATA TTCCGGAGCC CTATCGCAAT
CCGGAAAGCG TGCAGGGCGT GGACTGGTTC GATGCCGTAA CACGGACGGC CCTGATGTCG
GACTTGAACG TAAGCGTCAG TGGAGGAAGC CAGCTCGTTA CCGCCTACTT TTCGGCCGGC
GTGTTGCGGC AGGAAGGCGT GCTCAGGAAC ACCGACTTTA CGCGGTATTC CCTCCGGGCC
AACCTGCGCT TCTATCCCAA CGACTGGATC AACCTGGGAT TGAACGTGTC GCCGGTATTT
TCACGGCGCA GTCTGCCCGT GCAGGGGGGC GGTGGCATCT GGGATGAGAC TTTGCAGCGC
AATGCAGGGG CCATTTCGAT GGGACAGATT CTGGTAACCT GCCCGATTGC CAGTCTCGAC
GATGTGCAGG TGGGCTGCCC GGGCACCTTA TCCTGGCCCA ATCCCGTCCT GGCGCTGGAA
AGCCTGACGC TTGGCACGGA GTCGGCCCGC TTTGTGGGCA GTTCCTTCGT GGAACTCGAA
CCTGTCTCGG GTTTGCGGCT GAAGTCGCAA CTGAATACGG AAGTGTTCGG GAGCGAGACC
CAGTTCTACC GGCCCTCGAC GATCGGAACA ATTAACACGC CACCTCCTCT GGCGCCGCAG
GGACGCTACC AGACCAGCAG CTATTTGAAC TGGCTGAACG AAAATACGGC CACCTGGAAT
CTGGCGCTCG GGGATCATTC GGTCGAGGTG CTGCTGGGCA CCAGCTTTCA GAAGCACACG
CAGCGGACCG GAAGCTTTAC CGGCGAGGAA TATCCAAGCG ACGAGGTCAA GACGCTGAAC
GCGGCCGCGC GCATTACGGG CCAGACGCTG ATCGAAGAAT GGGGCATGAT CTCTTATTTC
GGACGGGTCA ACTACGAGTA TCAGAATAAA TACTTCCTCA CGGCGTCGCT GCGTCGCGAC
GGTTCGTCCC GGTTTGGCCC GAGAAATCGA TGGGGGACGT TCCCGGCCGT CGCGCTCGGC
TGGCGTCTGT CGGAAGAAGG GTTCCTGCGG GGGGTTAACT GGATTGACGA TCTGAAACTG
CGGTTTTCCT GGGGCGAGAC CGGTAACAAC AACATCGGCA ACTACGATTA CATCAGCCGG
GTGACCTCGC AGAATTATGT ACTGGGCGGC GGCCTGGCTT CCGGTCGCGT GGTTTCCTCG
CTGGGCAACG ATCTGCTGGG ATGGGAGACC ACGCGGGAGA CCAACCTGGG GCTCGATGTG
ACGCTGCTGA ACAATCGCAT CAACCTGAGC GCCGAGGTTT ACCAGAGCTA TACGACGGAT
CTGCTTCTTG ACGTAGAAAT CCCGCTGTCT TCCGGTTTTA CCACGATCAA GGAGAATCGT
GGCAAGGTCA GAAACCGGGG AATCGAGGTG GCGCTGCAGA CGACCCCGGT CAGAAGAAGC
AATTTCGTCT GGATCTCGAG CTTTAACGTG TCGGCCAACC GAAATGTCGT CCTGGAACTG
GGTCCCACCG GCGCGCCCAT CTACAGCGGT CGCAGCGGTG AGGCAAACCC CACGCATATC
ACGATGATCG GCAAGCCGGT GGGTATGTTT TTCGGGTATG TGTTTGAGGG GCTTTATCGC
GACTGGGATG ACGTCAACAA CAGTCCGCAT TTTCCGGGCG CGATCCCGGG GAACGTGAAG
TACCGCGACG TGAACGGAGA CGGTACGATC TCACCGGTGA GCGACTTCGA CATCATCGGA
AATCCCTACC CGGATCTGGT ATTCGGTATC ACCAACAGTA TCACCTATAA AAACCTGGAC
GTGCAGCTTG TGCTTACGGG GCAACTGGGC GGGGAGAAGC TGATGGCCTT CAAGGAATCG
CTGAACAACA TCGACGGCGT GTTCAATGTG GAGCGCGAGA TGCTGCAGCA GTGGCGCTCG
CCCGAAGATC CCGGAAACGG CCGGGTGCCC ACGACGGCCG GGACCGCACT TGGCCGGGTC
CTGTATCGCG ATGTCAACTC GCTGTGGGTC AAAGACGCCT CGCACCTGGC CATCAAGAAC
ATCACGGTCC GCTATAACCT GCCCAACCGC TGGTTCCAGT CCTGGATGTC GATCAACCGG
GCGTCCGTCT ATCTGAGCGC CCAGAACGTG TACTACTTCA CGAGCTATCC GGGCAATCCG
GAGCAGACCA ACTACAGCGA TATTGTGGTT GATGCCAATA CTGCTTTGCG CTATGGCAAT
CCCAACCTGA CGCCCGGGCT GGACTATGCG CCCTATCCGT TGCCCCGTAC GGTGACGCTG
GGCATCGAAC TCTCGTTCTG A
|
|---|
| Protein sequence | MLNDWYNVWR NGWKRFGFWL VHVWLLTASA SIAQAQTGAV TGRVTDADTG EPLPGVNVVV
EELATGAATD VEGRYTISGL RPGTYTLRAS FVGYEDQTQA VAVRAGETVE VNFALQPTTL
GLQEVVVVGY GTQRWEDVTG SVAAVRTENL ALMPVTGPDQ ALAGQVAGVQ VLQGSGIPGG
GPQIQVRGVG AIGAGNQPLF VVDGFPLPSS TNEIRNPLND IPPEDIESIT ILKDASAAAI
YGSRAANGVV IITTKSGRGQ RPTVTITSSI GVQQIPPERK PDIMSAREFA QWMKERYEDH
VRIDLGREPT PDDIPEPYRN PESVQGVDWF DAVTRTALMS DLNVSVSGGS QLVTAYFSAG
VLRQEGVLRN TDFTRYSLRA NLRFYPNDWI NLGLNVSPVF SRRSLPVQGG GGIWDETLQR
NAGAISMGQI LVTCPIASLD DVQVGCPGTL SWPNPVLALE SLTLGTESAR FVGSSFVELE
PVSGLRLKSQ LNTEVFGSET QFYRPSTIGT INTPPPLAPQ GRYQTSSYLN WLNENTATWN
LALGDHSVEV LLGTSFQKHT QRTGSFTGEE YPSDEVKTLN AAARITGQTL IEEWGMISYF
GRVNYEYQNK YFLTASLRRD GSSRFGPRNR WGTFPAVALG WRLSEEGFLR GVNWIDDLKL
RFSWGETGNN NIGNYDYISR VTSQNYVLGG GLASGRVVSS LGNDLLGWET TRETNLGLDV
TLLNNRINLS AEVYQSYTTD LLLDVEIPLS SGFTTIKENR GKVRNRGIEV ALQTTPVRRS
NFVWISSFNV SANRNVVLEL GPTGAPIYSG RSGEANPTHI TMIGKPVGMF FGYVFEGLYR
DWDDVNNSPH FPGAIPGNVK YRDVNGDGTI SPVSDFDIIG NPYPDLVFGI TNSITYKNLD
VQLVLTGQLG GEKLMAFKES LNNIDGVFNV EREMLQQWRS PEDPGNGRVP TTAGTALGRV
LYRDVNSLWV KDASHLAIKN ITVRYNLPNR WFQSWMSINR ASVYLSAQNV YYFTSYPGNP
EQTNYSDIVV DANTALRYGN PNLTPGLDYA PYPLPRTVTL GIELSF
|
|---|
| |