Gene VEA_001349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001349 
Symbol 
ID8559661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1532713 
End bp1533174 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content43% 
IMG OID646409018 
Producttranscriptional regulator LuxT 
Protein accessionYP_003288497 
Protein GI262396644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000649622 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAGC GTAGTAAAGA AGATACCGAA ATCACTATCC AAAAGATCAT GGATGCCGTT 
GTTGATCAGC TACTAAGACT AGGTTACGAC AAAATGTCGT ACACGACTCT AAGTCAGCAG
ACAGGTATAT CTCGTACCGG TATTAGCCAT CACTTCCCTA AGAAAACGGA CTTCACCGCC
GCACTGGATG GCCGTATCTT TAAAATGTTT ATTGAACACC TAGAGTTTGA TAAAGGGCTA
AGTGCATTTT CACAAAGTTG GATTAAAGCA CTGGAAGATG CTGAGTTCCT CGCGATTTTA
CGACTGCTAT TCCATCACAT TGTTACGGCC GAAAATGCGC AAGAATTTGC TGCTAACGGT
ATTGACCGTT TATACAAAAT GGTTGAAAGC CAGTTTGGCG CAGGTGGTGA CAAAGAGCTC
GAATGGTTGA TTGGTCGTTC ATTGATCCAA ATGAGCAAGT AA
 
Protein sequence
MPKRSKEDTE ITIQKIMDAV VDQLLRLGYD KMSYTTLSQQ TGISRTGISH HFPKKTDFTA 
ALDGRIFKMF IEHLEFDKGL SAFSQSWIKA LEDAEFLAIL RLLFHHIVTA ENAQEFAANG
IDRLYKMVES QFGAGGDKEL EWLIGRSLIQ MSK