| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000940 |
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| Symbol | |
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| ID | 8559253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1071614 |
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| End bp | 1072954 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646408611 |
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| Product | Na+ driven multidrug efflux pump |
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| Protein accession | YP_003288090 |
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| Protein GI | 262396237 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000926882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAA GCCAAAACAT CAACCAACGA ATGTCCATCG TGGCATTGGC TTGGCCGATT
CTTGTCGAAA TTTTGCTACG GACGGCTTTA GGAACCAGTG ACGTGTTCAT GCTGAGTGGC
TACTCAGACA AAGCGGTATC CGCTGTTGGT GTGATCACGC AGATTACCTT TTTCTTAATC
ATCGTTTCGA CGTTTGTCAG CAGCGGAACG GGGATTTTGA TTGCCCAATA CAACGGCGCT
GGGCGCGAGC AAGAGTCTGT GAACGTCGGC GTTGCAAGTA TTGCGCTGTC CGTGATTGTC
GGTGCGTTCT TGAGTGTGAT TGCCGTGCTT GGCGCGATAT TCCTGCTCCC GTATTACGGT
TTGGAGGCAC AAGTCGAGCA ATACGCACGT GAATATTTGC TGATCAGCGG AGCGATGACG
TTCAACGTCA CCATAGGCAT AGTCTTTACG ACCATTCTGC GTAGCCATGG CTATTCACGC
TCTCCAATGG TGGTGAACTT GATCTCGGGT GTGTTCAACA TCATTGGTAA CTATATTGCG
CTTTACCAGC CATTCGGTTT ACCTGTGTAT GGTGTGCAAG GTGTAGCAAT AGCAACCGTC
GTCAGCCAAG TCATCGGTAC GTTAATGTTA TGGTTTATTC TCGCTCGCAG CAGCATTGAA
CTACCAATGT CGACCATGAA ACAAGTGCCC GCAGAAATTT ACAAAAAGAT CTTAAAAATC
GGCGGTATGA ACGCGGGTGA AGTGCTGTCT TACAACGTGG CGCAAATCTG CATTGTGTAC
TTTGTGGTGC AAATGGGGAC GGCATCGTTG GCGGCTTTCA CTTATGCGCA AAACATTGCC
CGTTTCTCGT TTGCTTTCGC GTTGGCAATT GGTCAGGCAG CGCAAATTCA GACTGGTTAC
TACATCGGTA AAGGTTGGGT GAGCAGCATT TTAAAACGTG TACAAATCTA CTTCTTAGTG
GGATTTGTGG CATCAACGGC GGCAACCACA CTGATTTACC TGTTTAGAGA AGAGATTCTG
CGCGTATTTA CCGATCAACC AGAAATACTC GCATTGGCAG GCTCGTTAGT CATGGGCTCA
ATTTTGCTCG AAGCCGGACG TGTGTTTAAC CTGATTTTTA TCGCGGGGCT CAAAGGCGCG
GGTGACATCA AGTTCCCAGT GCAAATGGGG ATTTTGAGTA TGTGGGGACT AGGCGTGCTT
TTCTCTTACA TCTTTGGCAT CCACTTGGGT TATGGCGTTT TAGGGGCTTG GATGGCAATC
GCACTCGATG AATGGGTACG TGGTATCATC ATGGCAAGGC GTTGGCGCTC TCAGGTGTGG
ACCAAGTTTA AGGTGAGCTA A
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| Protein sequence | MPKSQNINQR MSIVALAWPI LVEILLRTAL GTSDVFMLSG YSDKAVSAVG VITQITFFLI
IVSTFVSSGT GILIAQYNGA GREQESVNVG VASIALSVIV GAFLSVIAVL GAIFLLPYYG
LEAQVEQYAR EYLLISGAMT FNVTIGIVFT TILRSHGYSR SPMVVNLISG VFNIIGNYIA
LYQPFGLPVY GVQGVAIATV VSQVIGTLML WFILARSSIE LPMSTMKQVP AEIYKKILKI
GGMNAGEVLS YNVAQICIVY FVVQMGTASL AAFTYAQNIA RFSFAFALAI GQAAQIQTGY
YIGKGWVSSI LKRVQIYFLV GFVASTAATT LIYLFREEIL RVFTDQPEIL ALAGSLVMGS
ILLEAGRVFN LIFIAGLKGA GDIKFPVQMG ILSMWGLGVL FSYIFGIHLG YGVLGAWMAI
ALDEWVRGII MARRWRSQVW TKFKVS
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