| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000242 |
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| Symbol | |
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| ID | 8558547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 263771 |
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| End bp | 265531 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646407907 |
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| Product | ABC-type multidrug transport system ATPase and permease component |
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| Protein accession | YP_003287395 |
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| Protein GI | 262395542 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGAA AAAATAACAA AAATCTCAGC ATTCTTCTTA AACTCAACAC CTTTATTGCA
CCTTATAAAT GGCGGGTTGC GGCGGCTTTG GTTGCCCTTG TCGCGACAGC AAGTTTGACG
TTATCCGTTG GCTATGGAGT ACGTATTCTT ATCGACCAAG GCTTTGCTCA GCAATCATTG
CAAGAGCTTA CCAATGCGAT TCAGTTTATT GTCGGTGTCA CATTGTGTAT TGCCATTGGG
ACCTTCTTTC GCTTTTACCT TGTCTCTTCC GTAGGTGAGC GCGTCAGTGC GGATATTCGC
CTTTCAGTGT TTAACCATGT GATTACGCTG CATCCGAGCT ATTTTGAGAC CAACAGTAGC
GGCGATATTA TGTCGCGCCT GACTACCGAT ACCACGTTGC TGCAAAGCAT TATTGGTTCA
TCGTTCTCGA TGGCGATGCG TAGCGCTTTG ATGTGCTTTG GGGCCATCAT AATGTTGTTT
GCCACCAACG TTAAGCTCAC GCTGATTGTG CTTGCTTCTG TGCCTTTGGT TTTGGTTCCG
ATTTTGTTTT ATGGACGACG CGTGCGTGCG CTCTCTCGCC AAAGTCAAGA CTCAATGGCT
GATGTCGGCA GCTACGCAGG TGAAGCGATA GAACATATTA AAACCGTGCA AAGTTTTAGC
TCAGAGCCGT ACGAACGAGC GGCTTTCGCT GTCGAGGTGG AAAAAGCGTA TGAAGTGGGC
AGACAGAGAG TAAAACAGCG CGCAATCCTA ATCTCTGGCG TTATTGTAAT TGTGTTCAGC
GCAATTGCAG GCATGCTTTG GGTTGGCGGC AGCGATGTGA TTCACGGAAA GATGTCTGCG
GGAGACCTAG CAGCGTTTGT GTTTTACGCC ATTATGGTTG CCTCATCGAC TGCAACCATT
TCCGAAGTCA TGGGTGAACT GCAAAGAGCC GCAGGTGCTA CCGAACGGCT GATTGAGATC
CTTCAAGTAG ACAGCGATAT CAAAGCGCCA ATCAACCATT TGCCTATCCG TCCCGACATG
CCTGCTGAGG TTAACTTTAA ATCGGTGAGT TTCAACTACC CTTCTCGCCC AAATCAACCA
GCTATCAAAG AGTTAAATCT AACCGCAGAA CAAGGCAAAG TATTGGCGTT GGTTGGCCCT
TCTGGTGCAG GTAAAACAAC ACTATTCGAA CTGCTGCAAC GCTTTTACGA CCCGCAGCAA
GGGCAAGTGT TGTTTGGTGG TGAAGATATT CGACAGTTCG ACCCAAACGA GCTTCGACGC
CAAATGGCAC TCGTACCACA ACAGCCAGCG CTGTTTAGCC ATGATGTGTT CCACAATATT
CGCTACGGCA ATCCAGAAGC CACGGATGAA CAAGTCATCG AAGCCGCCAA AAAAGCTCAT
GCCCATGAGT TTATAGAGAA GCTTCCCGAA GGCTATCACA GCTTTTTAGG CGAGCGCGGC
GTTAGACTAT CAGGTGGTCA AAAGCAGCGC ATTGCGATTG CCCGCGCGAT TCTAAAAGAT
CCAAAAATCT TACTACTAGA CGAAGCTACC AGCGCCCTTG ATAGTGAAAG TGAACATCAC
GTTCAGCAAG CACTTGAAGC ACTGATGAAA GGACGCACAA CACTTATCAT TGCTCATCGC
CTTTCGACTA TCCAACATGC GGATAAAATA GCGGTGCTGG ACAATGGTGA GTTAGTCGAT
GTTGGTAACC ACCAATCATT AATGCAAAGC TGTGAGTTGT ATCAGCGACT CGTGGCGTTA
CAATTTAAGC ACTTAGAGTA A
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| Protein sequence | MSRKNNKNLS ILLKLNTFIA PYKWRVAAAL VALVATASLT LSVGYGVRIL IDQGFAQQSL
QELTNAIQFI VGVTLCIAIG TFFRFYLVSS VGERVSADIR LSVFNHVITL HPSYFETNSS
GDIMSRLTTD TTLLQSIIGS SFSMAMRSAL MCFGAIIMLF ATNVKLTLIV LASVPLVLVP
ILFYGRRVRA LSRQSQDSMA DVGSYAGEAI EHIKTVQSFS SEPYERAAFA VEVEKAYEVG
RQRVKQRAIL ISGVIVIVFS AIAGMLWVGG SDVIHGKMSA GDLAAFVFYA IMVASSTATI
SEVMGELQRA AGATERLIEI LQVDSDIKAP INHLPIRPDM PAEVNFKSVS FNYPSRPNQP
AIKELNLTAE QGKVLALVGP SGAGKTTLFE LLQRFYDPQQ GQVLFGGEDI RQFDPNELRR
QMALVPQQPA LFSHDVFHNI RYGNPEATDE QVIEAAKKAH AHEFIEKLPE GYHSFLGERG
VRLSGGQKQR IAIARAILKD PKILLLDEAT SALDSESEHH VQQALEALMK GRTTLIIAHR
LSTIQHADKI AVLDNGELVD VGNHQSLMQS CELYQRLVAL QFKHLE
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