| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000178 |
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| Symbol | |
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| ID | 8558483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 191134 |
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| End bp | 192843 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407843 |
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| Product | SgrR sugar-phosphate stress transcriptional activator of SgrS small RNA |
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| Protein accession | YP_003287331 |
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| Protein GI | 262395478 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.976786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCC CTCGTTTACG TGTTCAGTTC GAAACACTGT TTGAAAAATT CGCCGGTCAC
GATACGGACG TTCAGCTCGA AGACATTACC GAAGCGCTGT TTTGTACACG TCGCAATGCC
CGTATTGTTC TCAATAAATT AGAAGAGGAG GGCTGGATTG AGTGGCATCC AGCGGCGGGT
CGGGGAAAAC TCTCAAAACT CGTTTTCAAA CGTAACCGTA GCGATGTCAG TGAAAACCTC
GCCAGACGTT ATCTTGACGA AGGGAAAATT GGCCAAGCTC TAGATGCGCT TGATAACGAC
GCGGCTCGAT TAACGCAGGT TATTCAGGGT TATTTAGGGC TTCAGCATCG GCAGGGCGAA
CAGGTGGTAC GTTTGCCATA TTATCGACCA TTGGCGATGT TAAACCCACA GAAACCGATG
CGGCGTTCTG AACAGCACAT CGCCAGACAA ATTTTTAGCG GGCTAACTCG CCTTGATGAA
AATGAACAAC TTCAGCCAGA TTTAGCCCAC ACATGGGAAG CCATTTCTGA TACGCACTGG
CGTTTTTATC TTCGTCGTGG GGTGCGTTTT CATAATGGTG AACCGTTATC AACCAGTTGT
GTACTTGAAA GTGTGCTTGC ACTAAGTAGC CTGAACCTGT TTTCTCATAT AAAAAAGGTA
TCTTCACCAC AGGAATGGAC CGTCGATATT GAACTCGTCC GTCCTGATCG CTACCTGCCT
TTGGCGCTGA GTGAGTCGCA AGCAAAAATT TTGCTACCAA GCGCTTTGCG TTCAGAAAAC
TTCGATAGAC AACCAATAGG GACTGGGCCG TTCCAAGTTA AAATGAATGA TGATAAGCGT
CTCATTTTGA CTGCTTTTGA TGGCTACTTT GGCTTTCGTC CCTTGCTGGA CCAAGTTGAG
GTGTGGGTAA TTGATGAAGC GTACTCTTCA ATGGTCTATC CAAGCTTGTC TAAGCCAAAG
ATGGATAAAC AAGGTTCATC TGATGAGGTC GAGCTTGATC CTGGCTGTAC ATTTCTATTA
CTAAACAAAA ACACCGGGAT TGCAAAAGAC CCACGCTGGG CAGAATTTCT ATCACAAACT
CTCAACAGTC ACCAGATTTA CGCGCATGTT CCTCAAGATA AAGTGATGGA ATTGGGTGTA
TTGCAAGCCT TTGGCCTTAA GCCAGGTTGG ATTGATCTTA GGCCAGCAGA GGCGGGCAGC
GTGCCGCAGG CTGATAAGGT GATTTCCGTA GCGTATCAGA AAAAGCATCC GATGTTTCCA
GTAGTTGCCA AGGCCATCAA GACACTCTTA AAACCGCACG GTATAGAGGT CGAGTTTATT
CGTTATGATT CTCAACCGCC CGCACCGGAG GAAGTGGATA TTTGGGTGAA AGCCATGGGT
ATTGCAACGA ATCGAAATGA CGCGTTGGCT GGCTGGCTTC TGGATTACAG TGATATTGAG
AAATTCAGTT CTGGTTACGA TTTTAGCGAA TGGGCGAAGC TCGTTGATCA GTGGCGTGCT
GGTGTTTATC CAGACTTCCC TGCACGTGAG TTAGGACGTC AGTTGGTAAA AAGTTGTCAG
GTGATTCCGA TGTTTCACTG CTGGTTGGGT GTCAATAAAG ACCACAGCGG CGCCTTACAA
AATGCAAAGT GTAATGCCTT AGGTTGGTTT GACTTTAATA ACGTATGGGT AAAACCTGAT
ATAGAAATGA ATCATGGCGA AACCGAATAA
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| Protein sequence | MSSPRLRVQF ETLFEKFAGH DTDVQLEDIT EALFCTRRNA RIVLNKLEEE GWIEWHPAAG
RGKLSKLVFK RNRSDVSENL ARRYLDEGKI GQALDALDND AARLTQVIQG YLGLQHRQGE
QVVRLPYYRP LAMLNPQKPM RRSEQHIARQ IFSGLTRLDE NEQLQPDLAH TWEAISDTHW
RFYLRRGVRF HNGEPLSTSC VLESVLALSS LNLFSHIKKV SSPQEWTVDI ELVRPDRYLP
LALSESQAKI LLPSALRSEN FDRQPIGTGP FQVKMNDDKR LILTAFDGYF GFRPLLDQVE
VWVIDEAYSS MVYPSLSKPK MDKQGSSDEV ELDPGCTFLL LNKNTGIAKD PRWAEFLSQT
LNSHQIYAHV PQDKVMELGV LQAFGLKPGW IDLRPAEAGS VPQADKVISV AYQKKHPMFP
VVAKAIKTLL KPHGIEVEFI RYDSQPPAPE EVDIWVKAMG IATNRNDALA GWLLDYSDIE
KFSSGYDFSE WAKLVDQWRA GVYPDFPARE LGRQLVKSCQ VIPMFHCWLG VNKDHSGALQ
NAKCNALGWF DFNNVWVKPD IEMNHGETE
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