| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000032 |
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| Symbol | |
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| ID | 8558330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 33886 |
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| End bp | 35019 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646407690 |
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| Product | exonuclease SbcD |
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| Protein accession | YP_003287184 |
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| Protein GI | 262395331 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.526134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTA TCCACACCTC AGATTGGCAT CTTGGTCGAC AATTCCACAA TGTATCACTA
CTCGAAGATC AACAAGCAGT ACTCGAACAA CTGATTAACT ATATTGAACA CAACCCCGTC
GATGCCGTTG TAGTGGCGGG AGATATTTAT GACCGTTCGG TGCCACCAAC GGTTGCAATA
GAACTGCTAA ATCGAGTCGT GAAGCGTATT TGTACTGAAC TGAAAACACC GATGATATTG
ATATCTGGCA ACCATGATGG TGCAGAACGA TTAGGTTTTG GCTCAGAGCA AATGAAAAAT
GCAGGCCTTC ATATTGTTAG TAACTTTGAA GATATGCTAA CTCCCATCAT CATAAAAACG
GACTCTGCGG GTGAGGTAGC GTTTTATGGC ATGCCTTATA ACGACCCTGA ACAGGTCAGA
TTTGCCTACA AAACCTCGGT ATCAACTCAT GATGAGGCAC ATCAACTGCT TGTAGAGCAA
ATAAGAGAGC ATTTCATTTC AGAGCAAAGG CGTGTTCTCG TTAGCCACTG TTTTGTTGAT
GGTGCTATTG AGTCTGACTC TGAACGACCA CTATCTATTG GTGGCTCTGA TCGCGTAAGT
CATGAGCATT TCTTAGATTT CGACTACGTC GCACTTGGTC ATTTACATCA GCCTCAGAAG
AAAGGCGCAG AGCATATCCG TTATTCTGGT TCACTTATGA AGTATAGTTT TGGTGAACAG
AACCAGAAGA AAGGCTTCAC GTTAGTCGAA CTAGACAAGA AAGGATTTGT CTCTGCTAAA
CATATTGAGC TAATTGCCCC TCATGAAATG CGCATTGTTG AGGGAGAGCT AGATAAAGTC
ATAGAGCAGG GCAAGACTGA CCCTAAAAAT GAAGATTATT TGTTAGTTCG TTTGATGGAT
AAACATGCGA TTTTAAATCC AATGGAAAAG CTTCGTTCGG TGTATCCAAA CGTTTTACAT
CTTGAGAAAC CGGGTATGTT AATTGGGGTA GAGCAGGAAA TGGCGCAAGC AAAGTTGGCC
CGAAGCGAAA TTGATATGTT CCGAGACTTT TTTATTGAGG CACAAGATAG TCAATTATCC
CAAGAGCAAG AACAAGCCGT TACTGACATT ATTAAGCAAT TATCACAGCA ATAG
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| Protein sequence | MKFIHTSDWH LGRQFHNVSL LEDQQAVLEQ LINYIEHNPV DAVVVAGDIY DRSVPPTVAI
ELLNRVVKRI CTELKTPMIL ISGNHDGAER LGFGSEQMKN AGLHIVSNFE DMLTPIIIKT
DSAGEVAFYG MPYNDPEQVR FAYKTSVSTH DEAHQLLVEQ IREHFISEQR RVLVSHCFVD
GAIESDSERP LSIGGSDRVS HEHFLDFDYV ALGHLHQPQK KGAEHIRYSG SLMKYSFGEQ
NQKKGFTLVE LDKKGFVSAK HIELIAPHEM RIVEGELDKV IEQGKTDPKN EDYLLVRLMD
KHAILNPMEK LRSVYPNVLH LEKPGMLIGV EQEMAQAKLA RSEIDMFRDF FIEAQDSQLS
QEQEQAVTDI IKQLSQQ
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