Gene VEA_004168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004168 
Symbol 
ID8557907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2841564 
End bp2842352 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content49% 
IMG OID646407268 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_003286791 
Protein GI262394937 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCCAG CACTATGGGT AAGTAAAACA GGTCTAGACG CCCAACAAAC CAACATTGCC 
ACGATTTCGA ACAACTTGGC GAACGCCTCT ACTGTGGGCT ACAAAAAGAG CCGTGCGGTA
TTCGAAGATT TGTTCTATCA GAACATCAAC CAGCCTGGCG GCCAATCATC TCAGAACACT
GAGCTTCCGA GTGGCTTGAT GCTAGGTGCG GGTTCTAAAG TGGTTGCGAC GCAAAAAGTG
CACACGCATG GTAATGCGCA GACAACGACC AACGCACTGG ACATGATGGT TGAAGGCGAC
GGCTTCTTCC AAGTGACGTT GCCGGATGGC AACATCGGTT ACACCCGTAA CGGTCAGTTC
ACGTTAAATG GTGAAGGCAC GTTAGTCACG TCGGGTTCTG GCTACCCTGT AGAACCTGAA
ATTGTGATTC CAGAAGATGC GATTTCTATC ACTGTCGGTA CGGATGGTGA AGTATCGGTT
CGCGTCCGTG GTCAGCAAGA CAACCAAGTC GTTGGTCAGC TAACCATTAC AGACTTTGTT
AACCCAGGTG GCCTAGAGCC AATTGGCCAG AACCTTTACT TACCAACGGG TGCTAGTGGC
GATCCACAAG AAGGTGTTCC TGGTTTGGAC GGTTTGGGTG AAATCCGTCA ATCCATGTTG
GAAGCGTCTA ACGTGAATGT AACGGAAGAG TTGGTCAACA TGATCGAAGC CCAGCGCGTT
TACGAAATGA ACTCAAAAGT GATCTCGTCA GTCGATAAGA TGATGAGCTT CGTTAACCAG
CAGTTATAA
 
Protein sequence
MHPALWVSKT GLDAQQTNIA TISNNLANAS TVGYKKSRAV FEDLFYQNIN QPGGQSSQNT 
ELPSGLMLGA GSKVVATQKV HTHGNAQTTT NALDMMVEGD GFFQVTLPDG NIGYTRNGQF
TLNGEGTLVT SGSGYPVEPE IVIPEDAISI TVGTDGEVSV RVRGQQDNQV VGQLTITDFV
NPGGLEPIGQ NLYLPTGASG DPQEGVPGLD GLGEIRQSML EASNVNVTEE LVNMIEAQRV
YEMNSKVISS VDKMMSFVNQ QL