| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002616 |
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| Symbol | |
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| ID | 8556344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1125846 |
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| End bp | 1127192 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405707 |
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| Product | multidrug resistance efflux pump |
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| Protein accession | YP_003285243 |
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| Protein GI | 262393389 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACT CAATTTATAG ACAGTTTTGG AAATATACGA TTCCAACCGT CGCAGCAATG
CTCGTGAACG GTTTATATCA AATAGTTGAT GGCATTTTTA TTGGCCGTTA TGTTGGTGCT
GACGGATTAG CAGGGATCAA TGTTGCGTGG CCGATCATCG GTTCCATCCT TGGTATAGGG
ATGATGATTG GCGTGGGGAC TGGTGCGCTA ACGTCGATTA AGCAAGGAGA AAACGATCAT
GAAGGCGCGA AGCGTATTTT AACAACCGGA TTGGGGTTGT TAACGATATT GATGCCGGTC
GTTGCTACCA TATTGTTCTA TTTTGCCGAT GAATTTATTC GCTGGCAGGG GGCGGAAGGG
CGAGTGTTTG AACTCGCGCT GCAATATCTG CATATTCTGA TTGTCGCGTG CGTATTTACG
CTAGGCTCTA TCGCGGTTCC ATTTCTTTTA CGCAATGACG ACAGCCCGAA CTTAGCAACG
ATGCTGATGG TCATCGGTGC TGTCATTAAT ATTGTATTAG ACTACGTATT TATTGCTTGG
TTGGGGTGGG AGTTAACCGG AGCGGCCATT GCTACAGCGC TGGCACAATT GGTGGTAACC
GTGCTTGGTA TTGGTTACTT CTTTACTTCA AAAGCGACCT TACGCCTTCG AATCAGTGAC
TTTAAGGTTC AAGTTGATGT TGCACCAAAG ATTATAATGA TCGGTACATC TAGCTTCTTT
ATGTACGCGT ACGGCTCTGT GATGGTGGCA ATGCACAACG CATTATTTGC TCAGTACGGA
AGTGCAATGT TGATCGGAGC GTACGCCATT TTGGGGTACA TCGTGACGGT TTACTATCTA
ATTGCAGAGG GAATCGCGAA CGGTATGCAA CCTCTAGTGA GTTTCAATCA CGGGGCGCGC
AACCAGGCGA ACGTCAGAAA ATTACTGCAA GTCGCAATGG GGACATCTGT GCTTGGTGGT
GTAGCGTTTG TTGGTTTGAT GAACCTTTTC CCGTACGAGT TGGTCTCGGT GTTTAACAAT
GCTGATCAAC AGTTGATTGA TAGCACGGTG ATCGGGATTC GTTTACACAT GTTTGCGTTG
TTCCTAGATG GCTTTTTAGT CGTGGCGGCT GCGTACTACC AATCGGTAAA CAAAGGCAGC
AAAGCCATGT TTGTGACATT AGGCAACATG TTGGTTCAAC TGCCGTTTTT ATTCGTTATG
CCGAAACTGT TTGGCGTGAC AGGTATTTGG CTGGCTTTCC CATTGTCCAA TATTGCGCTG
AGTTTAGTCG TGGTCAGTAT GTTGTGGCGG GACGTGAAAA AGCTGCTAAA CGAAACTTCG
GCTGAGCCAA CAGTGCAAGC CTGTTAA
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| Protein sequence | MQNSIYRQFW KYTIPTVAAM LVNGLYQIVD GIFIGRYVGA DGLAGINVAW PIIGSILGIG
MMIGVGTGAL TSIKQGENDH EGAKRILTTG LGLLTILMPV VATILFYFAD EFIRWQGAEG
RVFELALQYL HILIVACVFT LGSIAVPFLL RNDDSPNLAT MLMVIGAVIN IVLDYVFIAW
LGWELTGAAI ATALAQLVVT VLGIGYFFTS KATLRLRISD FKVQVDVAPK IIMIGTSSFF
MYAYGSVMVA MHNALFAQYG SAMLIGAYAI LGYIVTVYYL IAEGIANGMQ PLVSFNHGAR
NQANVRKLLQ VAMGTSVLGG VAFVGLMNLF PYELVSVFNN ADQQLIDSTV IGIRLHMFAL
FLDGFLVVAA AYYQSVNKGS KAMFVTLGNM LVQLPFLFVM PKLFGVTGIW LAFPLSNIAL
SLVVVSMLWR DVKKLLNETS AEPTVQAC
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