Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001829 |
Symbol | |
ID | 8555458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 217871 |
End bp | 219088 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646404822 |
Product | integrase |
Protein accession | YP_003284457 |
Protein GI | 262392603 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.854488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCAGT TAACAGTTAA GAAAGTGGAA GCATTAATTA AAACTAGTGG GGATAAAACA AAGCGCTATG GTGATGGTGG TGGTTTGTAT TTGGTTGTTC CCCATTCTGG CTATCCTAGC TGGATGCTAC GTTTCACATC TAACAAAAAG CGCCGCGAAA TGACACTCGG CAAAGTCAGT GACATATCTT TGCGTGACGC CCGACTCCTA GCTGCCGAAA AAATGAAACA AGTCCGTGAA GGGTTTGATC CGCTTATACA ACGCAAGCGC GCAGAGCAAG AAAAAATAAA AACCGTTAAC GACTTATTTT CAGACTGGTA TCCATCCCTA GAAAAACGTT TGAAGCACCC TAACATTCCT AAACGTGTCT TCTTAAAAGA TATTGCCCCT CATATCGGCG CTATCCCGCT TGAGCAAGTC AACGCTCGTG ATATTCGTAC CACTATTAAT GCCATTACTG CTGCTGGCAA ACCCGCAATT GCGAATGACG CCCTTAACTA TTGTAAACAA CTGTTCAACC ATGGAATGAA GCTCGACCTC ATGCAAGGTA ATCCTGCTTC TGCATTTACG GTTCGGGATG CTGGCGGTGT GGAAAAGAGC AGAGATAGAG CCTTAACTAC CGAAGAGCTC AAGCAGTTTT TTAATACCGC TAAACAAAAC CCGATGAGCT TTACCCGTGA CAACTATTTA GCATGCGCCT TACTAGTGTG CTTAGGTGTG CGTAAATCCG AGCTGTGCGA AGCCAGATGG GAAGAGTTTG ATTTAGAAAA AGCAGTGTGG GAACTCCCAA AAGAACGCAG CAAAACCAAT GTCGCTCTTA CTATCCCTTT AGCGACACCA GTATTAGAAT GGCTTGAAGA ACTGAAAGTG AGAAGCTTAG TCTCTGACTA TGTATTCCCT AGTCGCCGAT CCAGTAAAAA TCCACATATG GGGACAGATA CGCTTAATCG TGCGATTACC AAACTATTCG GACATGAACC TGGTAAAAAG AAACAGCCGC CAAATCTTAT GGGGGATATG CCTCGCTTTA CTGTTCATGA CCTACGCCGT ACGTGCCGAA CCTTATTGGC ACAACAAGGC ACCCCCGGCC ATGTGGCCGA GAGGTGCTTG AATCACAAGT TAAAAGGTGT TGAAGGGATT TATGATCGAC ATGATTATTT TGAAGAGCGG AGAGAGGCTT TAGATAAACT AGCATGGCAA ATTGCTACCT TTACTTAA
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Protein sequence | MSQLTVKKVE ALIKTSGDKT KRYGDGGGLY LVVPHSGYPS WMLRFTSNKK RREMTLGKVS DISLRDARLL AAEKMKQVRE GFDPLIQRKR AEQEKIKTVN DLFSDWYPSL EKRLKHPNIP KRVFLKDIAP HIGAIPLEQV NARDIRTTIN AITAAGKPAI ANDALNYCKQ LFNHGMKLDL MQGNPASAFT VRDAGGVEKS RDRALTTEEL KQFFNTAKQN PMSFTRDNYL ACALLVCLGV RKSELCEARW EEFDLEKAVW ELPKERSKTN VALTIPLATP VLEWLEELKV RSLVSDYVFP SRRSSKNPHM GTDTLNRAIT KLFGHEPGKK KQPPNLMGDM PRFTVHDLRR TCRTLLAQQG TPGHVAERCL NHKLKGVEGI YDRHDYFEER REALDKLAWQ IATFT
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