| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_4161 |
|---|
| Symbol | |
|---|
| ID | 8553542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 4461351 |
|---|
| End bp | 4464032 |
|---|
| Gene Length | 2682 bp |
|---|
| Protein Length | 893 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | regulatory protein LuxR |
|---|
| Protein accession | YP_003275213 |
|---|
| Protein GI | 262204005 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.339617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCG TGGTGAACAG GGCGCGGTGC ATCGGGCGGC AACCTGAACT CGACGTACTG
GCCGAGGAGG TCCGCCACGC CGAGCGCGGC GGAGTTCGCC GCGTCGCGGT CATCGGTCAG
CCGGGCGTCG GCAAGAGCGC ACTCCTGCGC GCCGCCGGCG ACTACCTCTC CGCAGATCAC
CCCACTGCGG ACCGGAGCGC CGAGGTGCTG TTCGCGACGG TCCCGGCGGA TCGGTCCGCG
GCGCCCGGCG CGATGCTGGC CCAACTCCTG CAAACCGAGC CGGGCCCCAT TGCGGAGATG
ACCGACGCGC TGCTGTCGCG GTTGTCGGGG GCGGGTCCGG TCGTGGTCCT CGTCGACGAT
GCGCATCACG CGGATGACGA ATCACGCTCT GCGCTCGCCG GTCTGCTCGC CCGTCATCGC
TCATCACCCG TCGTGGTCGT GGAGGCGGTG AGCGCCGAGA CGTCGTCACC GCTCGCAGAC
ACCGAGTTGC GCCTGGGTGG TCTCGATCCC GAGTCGGTGG GTGAGCTGGC CCGCGATCGC
GGCATCATCC TGCATCCGTC GATGCGTGAT CATCTGTGGC GGCACACCGC CGGCGTACCG
CGCGACGTCC TGGGCCTTCT CGACGAGGCA CCCCGGACGT TGTGGTCACA ACCCGGGGGC
GATCTTCCGG CACCGGCACG CACCCGGGAC GAGACGGCCC GGCACCTTGC TTCCTGCCCC
GCCGACGGGC GCGCACTCAT CGAAGCGATC GCTGTCCTGG GCGACGAGGA AACGCTCTCT
CTCGCAGCAA CTCTCGCCGA GGTTACCGAT GCGTTCACGG CCGCCGATCA AGGTCTGGCG
ACGGGGCTGC TGATCCGCTC GGCGGATCTC GCGCCGGGGC AGGTGAGCAT CCGCCTGCGC
AGCCCCATCA TCCGTGCCGC AGTCATCGAA TCGATGGGGC TGCAACGGGT CTCGGCAGCA
CATCGGCGGG CTGCCGAGTT GGTGACCGAC CCGGTGACTC GACTGCAGCA TCGGGTGGCG
GCCACCGTCG GCACCGATGC GGCGCTGGCT GACGAACTCG ACGCACTGGC CCGCACGCGT
GCCGCCGACG GCGCCTGGCG GGAGGCGGCC AGCCTGTTAC GACAGGCCGG GCGTCTCACC
GACGAGGGAC TGGTGCGCGA CGAGCGTCAG ACCCGTTCGG TGGATGCCCT GCTGTCCGCG
GGCGACTGCA CCGCCGCGGC GGCACTCATC CCGGCGATCG AAACACTCCG CGAAACCGCC
TTGCGCAATG CGACTCTCGC CTATCTGGCC ATCCTGCGGG GACGATCCGC CGAAGCCGAG
GTACGGCTGG ATCGCGCCTG GTCGATCGTG AACACCGAAC GCGACCCGGA CGTGGCATCA
CTCATCGCCG CACGCCGGGT GCTTCACGCG CTGATCCGCG GACAGGGAGC CGATTTGATC
GAATGGGCCG ACCGAGCCGT CGAATTGACC GGCCCCACAT CACCTACCGG GGTGGAGGCC
ACCGTCATCC GCGGTCTCGG CGAGGCGTGG TCGGGCCATC CGCAACGCGG TATCGACACC
TACCACACAG TGTCCGAGGC CATCCGGCAC GGCGCACAGG CCCAGCGGGC CACGATGGGC
CGCGGCTGGC TCCAGCTGGG TGTCGACGAG TTGGATGCCG CGCGTACCAG TCTGGAAACG
GCGGTATCGA TGGCCCGGCT CGGCGGGTCC GACCGAATCA CGTTGTGGTC GTTGGCGTGG
CTCGCGCGCG TCCGGTTTGC GATCGGCGAG TGGGATGCCG CCGTGCATGC CGCGCGGGAG
GGACTTGCCC TGGCGGCCAC CAGCGGGATC ACCATTGCCA CCGGTCTTCT CGAATGGACG
CTGGCCCAGA TTCTGTCGAT GCGCGGCGAC TGGGATGGCG CACACGAGGC GGTTCGGCAC
GCCGAGTCGG CCGGCGCTGA TTATCCGACC ATGGAGATCC CCGCCCGACT CGCCCGCGCG
CACGTCGCCG AGGCTGCTGC CGACTACGCA ACGGTCATCC ATGCCCTGAG TCCGCTGGTG
GGCCTGTCAC GTTCGGTCCC CGCACTCGTC GAACCGGGAT TCTGGCCGTG GGTGGACGTT
CTGGCCAACG CCCTCATCGT CGAAGGACGG CTCGACGACG CCGAAACGCT ACTCGCCGGC
CATGAGCAGC GCGCGGCCGA CCGCGCTCAT CCCTCCGCGC AGGCCCGCCT CGGTTATGCC
CGCGGACGCC TCCTCGGCGC GCGTGGCGAC ATCAATGGTG CGCGAGGTGT TTTCGAGCGT
TCCGTCGGGC TCGTCCAATC CAGCCCCAAC CGGTACGACT CCGCCCGGGT CAACTTCGCC
TACGGCCAGA CATTGCGCCG GGCCGGTAAA CGTCGTGATG CCGACCGGGT GATGACGGCG
GCCCGCGACA TCTTTCTCGC CCTCGGTGCC CAGACCTACG TCGACCGTTG CGACCGCGAA
CTCAAGGCCG GCGGCCTCAA CACCTCCCCC GGCCGACGCG ACGACGTCCA CCTCACACCC
CAGGAAGAGT CTGTCACAGC GCTTGTGGCA CAGGGCCTTT CCAACAAAGA GGTTGCAGCC
GAACTGTTCA TCTCCACCAA GACGGTCCAG TACCACCTCA CCCGCATCTA CGCGAAGCTC
GGATTACGCT CCCGCGCCGA GCTCGTCGCG GCCCGGCGGT GA
|
|---|
| Protein sequence | MKRVVNRARC IGRQPELDVL AEEVRHAERG GVRRVAVIGQ PGVGKSALLR AAGDYLSADH
PTADRSAEVL FATVPADRSA APGAMLAQLL QTEPGPIAEM TDALLSRLSG AGPVVVLVDD
AHHADDESRS ALAGLLARHR SSPVVVVEAV SAETSSPLAD TELRLGGLDP ESVGELARDR
GIILHPSMRD HLWRHTAGVP RDVLGLLDEA PRTLWSQPGG DLPAPARTRD ETARHLASCP
ADGRALIEAI AVLGDEETLS LAATLAEVTD AFTAADQGLA TGLLIRSADL APGQVSIRLR
SPIIRAAVIE SMGLQRVSAA HRRAAELVTD PVTRLQHRVA ATVGTDAALA DELDALARTR
AADGAWREAA SLLRQAGRLT DEGLVRDERQ TRSVDALLSA GDCTAAAALI PAIETLRETA
LRNATLAYLA ILRGRSAEAE VRLDRAWSIV NTERDPDVAS LIAARRVLHA LIRGQGADLI
EWADRAVELT GPTSPTGVEA TVIRGLGEAW SGHPQRGIDT YHTVSEAIRH GAQAQRATMG
RGWLQLGVDE LDAARTSLET AVSMARLGGS DRITLWSLAW LARVRFAIGE WDAAVHAARE
GLALAATSGI TIATGLLEWT LAQILSMRGD WDGAHEAVRH AESAGADYPT MEIPARLARA
HVAEAAADYA TVIHALSPLV GLSRSVPALV EPGFWPWVDV LANALIVEGR LDDAETLLAG
HEQRAADRAH PSAQARLGYA RGRLLGARGD INGARGVFER SVGLVQSSPN RYDSARVNFA
YGQTLRRAGK RRDADRVMTA ARDIFLALGA QTYVDRCDRE LKAGGLNTSP GRRDDVHLTP
QEESVTALVA QGLSNKEVAA ELFISTKTVQ YHLTRIYAKL GLRSRAELVA ARR
|
|---|
| |