| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5275 |
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| Symbol | |
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| ID | 8547687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7252555 |
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| End bp | 7255047 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646389949 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003269653 |
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| Protein GI | 262198444 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTTACGC CCGCCCTCGA TATCGCCGCG TTCCTGGCCG CCTTGGTCGA AGCGCGCGGC
CCCGTCCAGC CGCGCCAAGC CCTGGCCAAC GCGCTGGCCG CCCTGGCCGC GCAGTCCAGT
GCCAGTCAGG CGCTGGCGCT GCGCCGCATC GACGCCTACG CGGCCGAGGC GCTCGCGGAG
TGGCCGGCGG GCTCGCTGCC GGGCGGCGTG ATCCACCCCG CCATCCTCGG CGACGCGGCG
GAAACCGGAC AGCCGGTCTA CCGCGACGGC AGCGAGCGCA TCGCGGCGAT TCCCAAGCGC
CTGCGCCACG CCGCCGCGGT GCTGCCGTGG ACCCTGGACG ACGGCTCTGC CGGCGCGTTC
GTCCTGGTGC GCGCGGGCGC GGCCTTCACC GCCGAGGAGC GGGGCTATCT CGAGAGCTTG
CTGGGCGTGC TCGGGCTGCT GGCCCAGCTC GTGAACACCA CCGCCCGGGC CGAGCGGCTC
GCGGCCCGCT TCGGCGCCAT CGTGCAGACC TTGCCGCACG CGCTGGTGTT CATCGACGAC
GACGGCAGCG AGGCCTTTGT CAACGGCGCC GCGGCCGCGC TGCTCGGCAT CTCGCCCGCG
GTCACCGAGC CGGCCAGGGT GTCGGCCGCC ATGCACGCGA TGCGCGCGCG CGCCAGCGAA
CAGGAAGACG CGCTGCGCAC CATCGCCACG GCAGTGGCCC ACGATCGCGA GATCCGCGAT
GTACGCCTGT CGCTGGCGGC CACCGAGAGC GCGCCGCGCA CCGTGCTCAG CGTCTCGTCC
ACGCCCACGC GCGAGCGCGG CACTCCGGGC CGGTTGTGGC TGTACATCGA CATCACCGCT
CGGCACCTGG CCCTGGAGCA ACTCGAGGCC AACAACGCCG CGCTCGAGAC CGCGCGCCAC
GCGGCCGACG CCGCCAACGA GGCCAAATCG CGCTTCCTGG CCACCATGAG CCACGAGCTG
CGCACGCCCA TGAACGGCGT GCTCGGCATG GCCGGGCTGC TGCTCGATAT GGGTCTGGCG
CCGGAGCCGA GCGAGTACGT CGAGACCATC CGCAGCAGCG GCGACGCCCT GCTCGCCATC
ATCAACGACA TCCTCGACTT CTCCAAGCTC GAGGCCGGCA TGTTCGAGCT CGAGCTGCAG
CCCTTCTCGC TGCGCTCGTG CGTCGAGGAA GCCTTCGATC TGGTCGCGGT CTCCGCGGCC
AAAAAGCGCC TCGAGCTGGC GCTGCGCATC GCCGAAGACG TGCCCTGGAC CGTGCGCGGC
GATATCACGC GCCTGCGCCA GGTCATCGTC AACTTGCTGA GCAACGCGAT CAAGTTCACC
GATGTCGGCG AGGTGGTCAT CGCGATCGCG TGCGCGCCCA AGATTGACTG CCAGCGCGCG
GGCGTGCGCC TGCACCTGAG CGTGCGCGAC ACCGGCGTCG GTATCCCGGC CGAGCTGCAC
AAGAGCCTGT TCCGGTCCTT CTCTCAGCTC GACGCATCGA TCAGCCGCAA ATACGGCGGC
ACCGGTCTGG GGCTGGCGAT CTGCGCGCGT CTGGTCGCGC TCATGGACGG GCGCATCTGG
GTCGAGAGCG AGCAGGGCGC GGGCGCGACC TTTCATTTCA CCATCGATGT CGACGCGGTG
TCCGATAGCG GCGATGCGGG CGAGGTCCAC GGGCCCAGCT ATCCCGAACT GGTCGGCCAG
CGCGCGCTGG TCGCGTGCGG TAGCGAGCAG GTCGGCCACT CGGTGGCCGA GCAGCTCAAG
AGCTGGGGCA TCGACGCCAA CTGCGTGACC ACGACCGACG AGGCCGTGCG CCGCCTGCGC
CTGTTGCCCT ATACCCTGGC CATCCTCGAC CGCCACCTGC CGGGCCTCGA CGCCCCGGCC
TTCGCCGAGC CGACGCTCGC GAGCGCGATC CGGGCCGAGG CCGCGCAGGC CGACCTGCCC
CTGATCCTCA TGGTATCGGC CGTGGACGTC GAATCGCGGC GCCTGGCCAC GCGCCTGGGC
GTGGGCTGTC TGGTCAAGCC GGTCAAACGC TCGCACCTGT TCGACGCCAT CATGTCGCAG
GTGATGAGTC ACGAGCGCTG GCAGCCCAAG CGCGCCGAGC TGCGCGGCGA CACCGGCTGG
GCCGAGCGCC TGCCGCTGCG CATTCTGGTG GCCGAGGACA ATGTGGTCAA CCAGAAGGTC
GCGCGCCTGC TGCTGCGCCG CCTGGGCTAC CGCTGCGACG TGGTCGCCAA CGGGCTCGAG
GCCGTGGACG CGGTGTCGCG CCGGCGCTAC GACCTGGTGC TGATGGACAT GCAGATGCCG
GAGATGAACG GCATCGAGGC CACCCGCCGG CTGCGCGGCG AGGCCCGCCC CGGCAGCCCG
CTGCACATCG TCGCCATGAC CGCCAACGCC ATGCGCGAGG ACCGCGAGGC CTGCCTGAGC
GCGGGCATGG ACGATTTCGT GTCCAAGCCG CTGCGCGTCA GCGATCTGGT CACCGTGCTC
GAGCGCCTGT CGGCGGCCGC CCGCGCCAGC TAG
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| Protein sequence | MLTPALDIAA FLAALVEARG PVQPRQALAN ALAALAAQSS ASQALALRRI DAYAAEALAE
WPAGSLPGGV IHPAILGDAA ETGQPVYRDG SERIAAIPKR LRHAAAVLPW TLDDGSAGAF
VLVRAGAAFT AEERGYLESL LGVLGLLAQL VNTTARAERL AARFGAIVQT LPHALVFIDD
DGSEAFVNGA AAALLGISPA VTEPARVSAA MHAMRARASE QEDALRTIAT AVAHDREIRD
VRLSLAATES APRTVLSVSS TPTRERGTPG RLWLYIDITA RHLALEQLEA NNAALETARH
AADAANEAKS RFLATMSHEL RTPMNGVLGM AGLLLDMGLA PEPSEYVETI RSSGDALLAI
INDILDFSKL EAGMFELELQ PFSLRSCVEE AFDLVAVSAA KKRLELALRI AEDVPWTVRG
DITRLRQVIV NLLSNAIKFT DVGEVVIAIA CAPKIDCQRA GVRLHLSVRD TGVGIPAELH
KSLFRSFSQL DASISRKYGG TGLGLAICAR LVALMDGRIW VESEQGAGAT FHFTIDVDAV
SDSGDAGEVH GPSYPELVGQ RALVACGSEQ VGHSVAEQLK SWGIDANCVT TTDEAVRRLR
LLPYTLAILD RHLPGLDAPA FAEPTLASAI RAEAAQADLP LILMVSAVDV ESRRLATRLG
VGCLVKPVKR SHLFDAIMSQ VMSHERWQPK RAELRGDTGW AERLPLRILV AEDNVVNQKV
ARLLLRRLGY RCDVVANGLE AVDAVSRRRY DLVLMDMQMP EMNGIEATRR LRGEARPGSP
LHIVAMTANA MREDREACLS AGMDDFVSKP LRVSDLVTVL ERLSAAARAS
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