| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5157 |
|---|
| Symbol | |
|---|
| ID | 8547568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 7104303 |
|---|
| End bp | 7105541 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646389833 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003269538 |
|---|
| Protein GI | 262198329 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.376133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.739341 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCC AGACCCTCAC CATCGCCCCG GGCAACCCCG ACTTCCTCGA CCTGCCCTGG
GACCAGCCGC TCGCGAGCTG GGACTCGCCC CGGCTGATCG AGCTGCCCAA GGGCGTTTCT
CGACACCCCG TCCGATTTCT CGCCTACGAG CAGGGCATCT ACGTGGTCAA GGAGCTGGCC
AGGAACGCGG CCCGCTGCGA CTACGAAGTG CTGCGCGCGC TCGAGGCCAA GGAGCGGCTG
TTGGCGGTGC CGCCCGTGGG CCTGGTCGAG CACCGTCACC CCGACGCCAG CGCCGAGCAC
TCGGCCGCGC TCATCACGCG CTATGTCGAG TATTCGTTCT CGTATCGCGA GCTGTTGCAG
GGCGCGGGCT TTGGCGAGCG GCGCACGCAG ATGCTCGACG CCTTTGCCGG ACTGCTGGTC
GAGTTACACG TCGCCGGCTG CTACTGGGGC GACTGCTCGC TGTCCAACGT GCTGTACCGC
TTCGACGCCG AGGCCGTGGA CACCGTCATG GTCGACGCCG AGACCGCGTT CATGCGCGAC
GCGCTCAGCG ACGGTCAGCG CGAGCAGGAT CTCGACATCA TGATCGAGAA CGTGGCCGGC
GGCATGGCCG ACATCGCGGC CTCGCAGGGG CTGGTCCTCG ACGACGCCGA CCTGTGGCTC
GGCGAGGACA TCGCCGCGCG CTATCGCAAG CTGTGGGACG AGCTGAGCCG CGTGGAGCTC
ATCGGCCCGG GCGAGCGCTA CAAGATCACC GAGCGCATCC GGCGCATCAA CGAGCTCGGC
TTCGTGGTCG AGGAGATCGA CCTCGTGCCC GCGGACGGCG GCGAGCGGCT GGCCCTGCGC
GCGCACATCG GCGGTCGCAA TTACCACTGC AACCAGCTCA AGGCGCTCAC CGGGCTCGAC
ACCTCGGAGT GGCAAGCGCG CCAGATCCTC TCGGACCTGC GCCACTTCCA GGTCCGCAGC
GCGGCGACCA CGAGAAACAG CAACAGCAAC AGCAACAGCA ACAGCAACAG CAACAGCAAC
AGGGACGTGG CCGCGATCCT GTGGCGCGTG CGTCGCTTCG AGCCCGCGCT GGCGCGCATC
CGGGCCACCC CGGGCGTGAG CGACCCGGTG CAGGGCTACT GCGACCTATT GCACTACCGC
TACCTCAAGT CCAAGGACGC CGGCTACGAC CTCGAGACCG AAGCCGCGCT CGAACAATGG
TTTGCGGACG GCCGTCCCGG ATACCTGATC CGCCCCTGA
|
|---|
| Protein sequence | MPRQTLTIAP GNPDFLDLPW DQPLASWDSP RLIELPKGVS RHPVRFLAYE QGIYVVKELA
RNAARCDYEV LRALEAKERL LAVPPVGLVE HRHPDASAEH SAALITRYVE YSFSYRELLQ
GAGFGERRTQ MLDAFAGLLV ELHVAGCYWG DCSLSNVLYR FDAEAVDTVM VDAETAFMRD
ALSDGQREQD LDIMIENVAG GMADIAASQG LVLDDADLWL GEDIAARYRK LWDELSRVEL
IGPGERYKIT ERIRRINELG FVVEEIDLVP ADGGERLALR AHIGGRNYHC NQLKALTGLD
TSEWQARQIL SDLRHFQVRS AATTRNSNSN SNSNSNSNSN RDVAAILWRV RRFEPALARI
RATPGVSDPV QGYCDLLHYR YLKSKDAGYD LETEAALEQW FADGRPGYLI RP
|
|---|
| |