| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5038 |
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| Symbol | |
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| ID | 8547448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 6950940 |
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| End bp | 6953774 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646389713 |
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| Product | peptidase M28 |
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| Protein accession | YP_003269419 |
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| Protein GI | 262198210 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.705528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACACG TACATCTTGA GCGACGCCCT GCGGCGTCCA TCCTGCCCGT CCTGGGCCTG
CTGCTCGGCG CTTGCGCGTC CGCGCCGGCC GGAGATCCGC AAGAGCCGGC GGCGCCCGCC
GACCAGGCTC AGGCACCAGC CCAGCCCAAC CCGGCGCTGC GCGACGCCCG CGAGGTGCAC
ATCGCCGATA TCGTGCAGCT CACCGACGGC GGCGAGAACG CCGAGGCGTA CTGGTCCTTC
GACGGCGACG AGCTGATCTT CCAGAGCAAG CGGCCGCCCT ACGAATGCGA TCAGATCATG
CGCATGCCGG CCGATGGCTC GGCCGAGCCG AGGGTGGTGT CCACGGGCAA GGGGCGCACG
ACCTGCGCCT ACTTCCTGCC CGGCGATGAC GACATCGTCT ACTCCTCGAC CCACGAGCTC
GGCCCCGAGT GCCCGCCCGA GGCCGATATG TCGCAGGGCT ACGTGTGGTC GCTCTACGAC
TACGATATCT ATCGCGCCAA GGCCGATGGC TCGGAGCTGG TCAATCTCAC CCAGCGCGAC
GGCTACGACG CCGAAGCCAC GGTGTGCGCC AAGGACGGGA CCATCCTCTT CACCTCCGAC
CGCGACGGCG ACCTGGAGCT GTATCGGATG GATCCCAACG GCGAAAACGT CGTGCGACTC
ACCAACACGC CCGGCTACGA CGGCGGCGCG TTCTTCTCGC AGGACTGCTC GCAGATCGTG
TGGCGGGCCT CGCGGCCGCA GGGCGAGGCG CTGGCCGACT TTCAGCGGCT GCTCGGCGAG
GGCCTGGTGC GCCCCAGTCT GCTCGAGATC TACGTCGCCG ATGCCGACGG CCAGAACGCG
CGCCAGATCA CCTATCTCGG CGCGGCCGCG TTCGCGCCCT ATTTCCATCC CTCGGGCAAG
CGGGTGCTGT TTTCGACCAA CTATCCCAAC CCGCGCGGAC GCGAGTTCGA TATCTGGTCC
GTGAACACCG ACGGCACCGG TCTCGAGCAG ATCACGTTCA GCGAGGGCTT CGACGGCTTC
CCCATGTTCT CGCCCGACGG CACCAAGCTG GCGTTCGCGT CCAACCGCAA CAACAGCAAG
CCGGGCGAGA CCAACGTCTT TGTCGCCCGC TGGGTCGAAG ACGCCGCCCC GGTCGAGAAC
GCCCGCCAGC CGGGCGCGGC CGATCGTTTC CGCGCCGACG TCGCCTGGCT CGCCGACGAC
GCTCGCGAGG GCCGCGGGAT CGGCACCGGC GGCCTCGACG CCGCGGCCGA TTGGTTGGTC
GAGCAACTGT CCGAAATCGG CGCCGAGGGC GCGGCCGATG ACGAGGGCGG TTACCGCCAG
GGCTTCGAGG TCACGACCGC GATCACGCCG GGCGCGGCCA CGGCGCTGCG CATCGACCGC
AAGCCGGTGC CGGCCGAGGC CTTTGTGCCG CTGTCGCAGT CGGCGCCCGG GCGGGTGCGC
GGCCAGACCG TGTTCGTCGG CTATGGCATC GTCGCCGACG AGCTCGGCGT GGACGACTAC
AAGGGCAAGA ACGTGCGCGG CAAGATCGCG GTCGTGCGCC GCTTTGCGCC CGCGGGCGCG
CCCTTTGACG ACGAGGCCGT GCAGCGGCGC TACAGCGACC TGGCGTACAA GGCCTTCATC
GCCCGGCAGA AGGGCGCGCG CGGCCTGATC ATCGTCGACG CCCCGCCGGC TGCGCAGGAC
GGGGCCGAAT TGCCGCCCGA CGCGCCGCTG CCGCTGCTCG CGCCCACGGG CTCGGGTGAC
GCCGGCATTC CCATCGTCGT GCTCACGCGC GCGGCCGGCG CCGCGCTCAC CAGCGGCCGT
CACCAGGTCG AGCTGAGCGT GGCCCTCGAG GCCGAGAAGC GCCGGGTCGA CAACATCGTC
GCCAAGATCC CGGCCGGCAA CCCCGACGGC GGCGGCGCGG TGCTGGTCGG CGCGCACTAC
GATCACCTCG GCATGGGCGG CGCCGGTTCG CTCGAGGTCG GGGCCACGGT GGTGCACAAC
GGCGCTGACG ACAACGCCTC GGGGACCGCG GGTCTGCTCG AGGTCGCGCG CCAGCTCCAC
GCGCGCCGGG CCGAGCTGCG CCGCGACGTC TACCTGGTCG CGTTCACGGC CGAGGAGAGC
GGCATCATCG GCTCGCGTTA CTTCACCGAG CACCCGCCCG CGGGCCTGCG CATGGACGGC
CTCACCGCCA TGCTCAACAT GGACATGATC GGCCGCATGC GCGGCAATCG GGTGTCGGTC
ATGGGCGTGC AGACCGCGGC CGAGTGGGAG GCCACCGTGG CGCCGCTGTG CGCGGCCGCG
CGCGTCGATT GCACCCTGGG CGGCGACGGC TACGGCCCCT CCGACCACAT GCCCTTCTAC
ACTTCGGGCG TGCCGGTGTT GTTCTTCTTC ACCGGCGCGC ATCCTGACTA CCACCGCGCC
AGCGACGACA TCGCGCACAT CAACGCCGGC GGCGGTGCGC GCATCGCCCA GCTTGTCGGC
GAGGTCGCGG TGGCCGCCGC CACCGGGCCG GCCAAGCTCA GCTACCAGCG CGCGCCCGTG
CCCGAGCGCC AGGGCGACGT GCGCGCCCAG GGCGGCTCGC TCGGCACCGT GCCGGCCTAC
GGCGAAGAGG GCAAGATCCC CGGCGTGTTG CTCAGCGACG TGCGACCCGA GGGCCCGGCC
GCGCGAGCCG GCCTGCGCGC CGGCGACCGC ATCGTGGCCA TCGGCGAGGT CGATGTGCGC
AACATCCGCG ACCTGATGTT CGTGCTGCGC GCCGCCGTCC CCGGGCAGAA GGCGACTATC
GTCGTGTCGC GCGACGGCGA GCGGGTGTCG CTCGAGGCGA TCTACGGCGC GCCCAGCCCG
CGCATCTCCC GCTGA
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| Protein sequence | MRHVHLERRP AASILPVLGL LLGACASAPA GDPQEPAAPA DQAQAPAQPN PALRDAREVH
IADIVQLTDG GENAEAYWSF DGDELIFQSK RPPYECDQIM RMPADGSAEP RVVSTGKGRT
TCAYFLPGDD DIVYSSTHEL GPECPPEADM SQGYVWSLYD YDIYRAKADG SELVNLTQRD
GYDAEATVCA KDGTILFTSD RDGDLELYRM DPNGENVVRL TNTPGYDGGA FFSQDCSQIV
WRASRPQGEA LADFQRLLGE GLVRPSLLEI YVADADGQNA RQITYLGAAA FAPYFHPSGK
RVLFSTNYPN PRGREFDIWS VNTDGTGLEQ ITFSEGFDGF PMFSPDGTKL AFASNRNNSK
PGETNVFVAR WVEDAAPVEN ARQPGAADRF RADVAWLADD AREGRGIGTG GLDAAADWLV
EQLSEIGAEG AADDEGGYRQ GFEVTTAITP GAATALRIDR KPVPAEAFVP LSQSAPGRVR
GQTVFVGYGI VADELGVDDY KGKNVRGKIA VVRRFAPAGA PFDDEAVQRR YSDLAYKAFI
ARQKGARGLI IVDAPPAAQD GAELPPDAPL PLLAPTGSGD AGIPIVVLTR AAGAALTSGR
HQVELSVALE AEKRRVDNIV AKIPAGNPDG GGAVLVGAHY DHLGMGGAGS LEVGATVVHN
GADDNASGTA GLLEVARQLH ARRAELRRDV YLVAFTAEES GIIGSRYFTE HPPAGLRMDG
LTAMLNMDMI GRMRGNRVSV MGVQTAAEWE ATVAPLCAAA RVDCTLGGDG YGPSDHMPFY
TSGVPVLFFF TGAHPDYHRA SDDIAHINAG GGARIAQLVG EVAVAAATGP AKLSYQRAPV
PERQGDVRAQ GGSLGTVPAY GEEGKIPGVL LSDVRPEGPA ARAGLRAGDR IVAIGEVDVR
NIRDLMFVLR AAVPGQKATI VVSRDGERVS LEAIYGAPSP RISR
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