| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3884 |
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| Symbol | |
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| ID | 8546280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5345915 |
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| End bp | 5351473 |
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| Gene Length | 5559 bp |
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| Protein Length | 1852 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646388556 |
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| Product | domain of unknown function DUF1745 |
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| Protein accession | YP_003268276 |
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| Protein GI | 262197067 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3287] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTCG AGAGCTTCAC ATACGATCTT GCGACGCGTT CCTGGTCGGT GCCGGCTCTT
CCCCATCTGG ATACGGCCAG TACGCTGGTG CTCGCGTTCG GCTCGCCCGA GATGGTGGCG
CACCCCAAGG TGTTCCAGCT CCTGCGCGAC GTGTATCCGC ACTCGGCGCT CATCGGCTGC
TCGAGCGCCG GTGTCATCGC CGGCGCCGAG GTCCACGACC AGGCGCTGAG CGTGGTGGTC
GCGCGCTTCG AGCGCGCCAA GCTGCGCACG GCCGCGGCCC TGGTGCGCGA TGTGAGCGGC
TCGCACGCGG CCGGCGCGAG CGTGGCCCGC AAGCTGGCCG GCCCGGGGCT GCGCGCGCTG
CTGGTGTTCG CCGAGGGCCT GCGCATCGAC GGCGACGCCC TGGTCGAGGG CATCCACTCG
GTGGTCGGCG ACGGCGTCGT GGTCGCCGGC GGTCTGGCCG GCGACGACAC CCGCTTCGAG
CGCACCTGGG TGTGCTCGGG CAATCGCCTG CAGAGCGGCC TGGTGGCCTG CGTCGGCTTC
TACGGCGACG ATCTCGTCGT CGGCTGCGGC TCGCAGACCG GCTGGGATCG CTTCGGCCCC
GAGCGCGGCG TGACCCGGGC CGACGGCCAC ACCCTGTACG AGCTTGACGA CGCGCCCGCG
GCCGATGTCT ACAAGCGCTA CCTGGGCGAG CGCCTGGCCG GTCTGCCGGC CACCGGCATG
CTGTATCCGC TGGCGCTGTG GCCGGCGGAC GAGCCCGCCT CGGTGTCGGT GCGGCCGCTG
ATCGCGGCCG ACGCCGAGAC CGGCGCGCTG ATGTACGCGG GCGCGGTGCC CGAGGGCAGC
CGCGCGCAGC TCATGCGCAC CGACGCGCGG CGGCTGCTCA GCAGCGCGGC CGACGCCTCG
CTCTCGGCCA CGCGCCAGGC CAAGCTCGAG CGCGCGGGCG GCGCCGGCGC CGAGGACGAG
CACAAGACGC CGGTGTTGGC GGTGGCGGTC AGCGGGCTGG GGCGGCGCAT GGCGCTGGGC
GAGCGCGCCG AGGAGGAGCT CAAGGCCGCG CGCCGCTCGC TGCCGGCGGG CGCGGTGTGC
GCCGGCTTCT ACGGCTACGG CGAGATCGCG CCGGGCGCGG CGGGGCGGGC GCGGCTGCAG
CATCAGAGCA TGACCCTGTT GCTGCTCGGC GAGCCGGCGG CCGCGCGCCC TCGCGAGCTG
CCGCGCGGGG TGCCGGTGCG CACGGCGACC GCGGTCGACT CGGAGCCGCA GTCGCTCGGC
GAGCTGTCGC TGTCGGCGCT GGTGCAGGCG GACGAGGACC ACACGGTCAC GGGCGTGTCC
GCGCTCGAGG ACGAGTGGCC CTCGGGCGTG CTGCCGCAGA GCTCGGGCTT CGTCGAGGTG
ACCTCGTTCA CCCACGACCT GAGCACCGCG AGCTGGTCGG TGTCGCCGCT GCCGACCCTG
GACTCGCCGC GCACGCTGCT GCTGGCCTTC GCGCCCTCGG ACGCGCGCTC GCATCCGCGG
ATCTTCGCCG ATCTCCGGCT GTCGTATCCG CGCTCGCACA TCATCGGCTG CTCGGCCGCG
GGCGAGATCC TCGACGGCCA GCCGCGCGAT CACGCGCTGG TGGCCACGGT CATGCATTTC
GCCCACACCG AGCTGGCCAG CGCCCAGGTC TCGGTGGCCA GCACGCGCGA GGGCGGGGCC
GCGGGGCGGG CGCTGGCGCG CGAGCTGGAG CGCCCGGATC TGCGCGCGCT GCTGGTGTTC
TCGAGCGCGG CCGCGGTGCC CAGCGAGCAC ATCGTGCGCG GCCTGCGCGA GGTGCTCGGC
GACGAGGTGG CGATCGCCGG CGGCGTGGCC GCGGGCGGGA CCCGGGGCGA GCACGCCTGG
GTGCTGGCCA AGGGCTCGCT GGCGCGGCAG ACAGTGGCCG CGGTCGGCCT CTACGGCGAC
CACCTGATCG TCGGCCACGG CGGCAAGGTG GGCTGGACCG ACATCGGCCC GGCGCGGGCG
GTGACGCGCT CGCAGGGCGG CGTGCTGCTC GATCTCGACG GCCGGCCCGC GCTCGACTGC
TACCGCGAGG CGCTGGGCGC GAGCAAAGGC CTGCCCGGGC ACATCCCGGT GGCCCTGATC
GGCGACGACG GCGCGCGCCG CTGGCGCGTG GTCGTGGCCA CCGACGACCG CCAGCGCTCG
CTCACCCTGG CCGGCGGCGT GCCCGCGGCC AGCCGGGTGC AGTTCGTGCG CACCTCGATG
GCCCAGATCC TGGCCAGCGC GGCCAGCGCC GGCGCCGCGG CCATGGAGTC GGCCGGGCGC
ACCGGGCCCA ACGCGCTGGG CCTGCTGGTC GGCAACACCG TGCGCCACAT GGCGCTGGGC
GAGAACGCGT CCAAAGAGGC CGCGGTGGCC GCCGAGGCCT GCGAGGGCAT CCGCCTGGTG
GGGTGTTACG CGCGCGGCGG GCTGTCCTCG CTCACGCCCG ACGAGAGCGC GCTGCAGATC
ACGGTGCTGG GCGAGTCGCC GACCCCGCGC CCGGCGCGTC AGCCCGCGCC GCGACCGGCC
GCGTCGCCGC CGCGGCCGCC GGCTGCGGTG GCGCGCTCGG CCGCGGCCCC GATGACGGCG
GCCGCCGCCG AGCTGGCCGT GGGCGAGGAC ACGCGCACGG TCGCCGAGCT CAAGGCCCGG
GTCGAGGAGG CCCACGCCGA TGTCGGCAGC GGCGCCGTGC CGGTCGCCGA GGAGGACGCG
CCGCCCTTTG CCGTGGCCTC GTTCTTCTAC GACGCCAAGG CCAAGACCTG GTCGCTGCCG
ACGCTGCCGG CCCTGGACTC GCCGCGCACG CTGGTGCTGG CTTTCGGCGC GCCCGAGCTG
GCCTCGACCC CCGAGGTCTT CAACCGGCTG CGCGAGACCT ACCGGCGGGC GCACGTCATC
GGCTGCTCGA GCGCTGGCGA GATCGCGGCG CGCGGGGTGC GCGACCACTC GCTGGCCGTG
GCCGTGATGC GCTTCGCCCA CACCGAGCTG GCCACGGCCT CGGTGGTGGT CGGCGACGCC
GCGGGCTCGT TCCCGGCCGG CCAGGTGCTG GCGCACAAGC TCAACGAGCC CGGGCTGCGC
GCGGTGGTGC TGCTCACCGA GGGCCTCGAG ATCAGCGGCA GCGAGCTCTT GCGCGGTATC
CAGTCGGTCA TCGATGACGA GGTGGTGGTG CTCGCCGGCG GGCTGGCGGG CGACGGCCTG
CGCTTCCAGC GCACCTGGGT GCTGTGCGGC GACGCGGTGC AGAGCTCGCT GGTGACCGCG
GTCGGCCTGT ACGGCGATCA CCTCAGCGTC GGCCAGGGCG CCGAGGGCGG CTGGCGGCCG
CGCGGTCCCT CGGCGATCAT CACGCGCTCG GCCGGCAACG TGCTCTACGA GCTCGACAAC
GTGCGCGCGC TGGACTGGTA CCGCGAGCGT CTGGGGCCGC AGGGCGCCAA GCTGCCGGCC
ACCGGGCTCA TGTTCCCGCT CGGCCTCGAT CCCCACGACG ACGGCGAGGC CACGCTGGTG
CGCTCGCTGC TGGCCATCGA CGAGACCGCG GGCTCGCTCA GCTTTGCCGG CGACATGCCG
CAGGGCACGC GCGTGCATCT GCTGGGCGCC AGCTCGACGC AGCTCGTCGG CGGCGCGCGC
ACGGCCGCCC GCATCGCGGC CGAGGACCTA GAGGTCGGCG GCGGGCCGAT GCTCGGGCTG
CTGGTGAGCG CGGTGGGGCG GCGCGTGGTG CTAGGCGACC GTGCGGTCGC CGAGGTCGAG
GCCGCGGCCG CGACCCTGCC CGAGGGCTGC GAGGCGGTGG GTCTGTACGC CTACGGCGCG
TTCTCGGGGT TTCGCGAGCG CGGCAGCGAG GTGCACAACC AGACCTTCTC GGTCACGCTG
CTGGCCGAGT CGAGCGAGCC GCTGACCAAG CCCACGGCCG CGGCCGTGAG CGCCTCGGGC
TCGATGGCCC ACGGCCAGGG GCTCACGCCC GCGCGCAGCG GCGGCCAGTT CGCCTCGAAC
ACGCCGGCCA GCGGCGTGGG CATGGCGGTG GCCGCGGGCA GCAACTTCGA GCTGTCGTGG
CGCGATGTCG GCGGGGTGCG GCTGATCGAG CTGGCCGGGC AGCTCAACGA GGACTTCGAC
AGCGACGCGG TGGCCGCGCT CATGCGCGGC ACGACGGTGC TCGACCTGGC CCACATCGAG
CGGGTGAGCT CGTACGGCGT GAGCGCCTGG CTGCAGATGC TCGAGCACGC GGCGCCGCGG
CTGAAGCACT TGTACATGGC CCGCTGCGCC GAGTTCCTGG TCGGCCAGAT GATGCGCTTC
CCCGAGATGT GCGGCGATGC CCAGCTCCTG TCCTTCGTGG CCCCGTACAC CTGCGACAAC
TGCGGCAACG ATTTCGTGCA CACGCTCGAC TGCAACCGCG ACGCCGACGA GCTGCGCGCG
GCCGCGCCGC CGAGCGTGCC GTGTTCGCTG TGCGACGCGC CGGCGCGCTT CGACGCCGAC
GCCGAGCGCT ACCGCGAGTT CTTCGCTCCC CACCTGGGCG AGGCTGCGCC GCGCGCGGTG
CGCCGCGCCC TGAGCCCGCA CGCGCGCGCT GACTCGGCCG CCGAGGACAG CCTCGAGGAG
CGCGCCGCGG CCGAGCGCCC GGTGCCGGCG CCGGCGCTGG CGCGGAGTTC GTCCGCGCGG
ACGAATGCGC TGCGCGGCGC CGGTATCGGC GTGCTGGTGA CCGCGCTCCT GGGCGCGTGT
CTGTATTGGC TGGGCAGCCG CCCGAGCGGC CCGGGCGCCG GCGAGGACCC GCGGCAGGTG
CCCGCGATCG CGCGCGCCGA CGCCGGCAGC GCGGCCGCGT CCGATCCGCC GCTGGCCATC
GACGCGGCGC GCGCCAAGAC CCCGCCGCCG GCGTGGTTCG AGCGGGCGGT TATCGGGGTC
GGCGACGAGC TGTTCGTCAT CGGCAAGAGC GGGCCGCGCG AGAGCGCCTA CAGCGCGGCC
GAGGCCGCCT ACCGCGACGC CGTGCGCGCG CTGCTCGAGC ACATGGTCTC GGGTCTGCGC
GGGGCCCCGG CGCACGCCTA CCTGCGCACG CATCTCGGCC CGCTCGGCGC GGACGCGAGC
GATGCCGCCG AGCAGCGCCT GGCGCGGGCG GTGGCGCGCT TCGAGACCCA GCTCGGGGCG
CTGGCCACTC TGCAGCGCGT CGACACCCTG GCCGACTACC ACGCCGACGA GGGCGACCCC
GCCGCGCGCG GCACCTCGCT GGCGGTTCGC TACCGGCTGC CGCGCGCCAG CTACGAGCAG
GCGCTGGCGC TGTACCGCGC GGCCGAGACC GGCTGGGGCA TGAGCGTGGT GACCGTGTTT
CCGCTGCTCG CGGCCGAGCT GCCGCCGCAG GGCGAGCTGT TGGTGGTCGA GGTGAGCCCG
CGCTCGCCGG CCGCCCGCGC CGAGATCGAG CCCGGCGACC TGATCTTGCG CGCCGAACAG
CGCTACGTGT CATCGCTGGA GGAGTACGCC GCGATCGCCA GCGGCCGCGA TGCCGATGAC
GACACCGCCG ACGCTGACGA GCATCATCCG CGCCATGAGC TCGAGCTCGA GCTGCTGCGC
GACGGCGAGC GCATGGTCAA GCGTCTCAAG CGCCGCTGA
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| Protein sequence | MHLESFTYDL ATRSWSVPAL PHLDTASTLV LAFGSPEMVA HPKVFQLLRD VYPHSALIGC
SSAGVIAGAE VHDQALSVVV ARFERAKLRT AAALVRDVSG SHAAGASVAR KLAGPGLRAL
LVFAEGLRID GDALVEGIHS VVGDGVVVAG GLAGDDTRFE RTWVCSGNRL QSGLVACVGF
YGDDLVVGCG SQTGWDRFGP ERGVTRADGH TLYELDDAPA ADVYKRYLGE RLAGLPATGM
LYPLALWPAD EPASVSVRPL IAADAETGAL MYAGAVPEGS RAQLMRTDAR RLLSSAADAS
LSATRQAKLE RAGGAGAEDE HKTPVLAVAV SGLGRRMALG ERAEEELKAA RRSLPAGAVC
AGFYGYGEIA PGAAGRARLQ HQSMTLLLLG EPAAARPREL PRGVPVRTAT AVDSEPQSLG
ELSLSALVQA DEDHTVTGVS ALEDEWPSGV LPQSSGFVEV TSFTHDLSTA SWSVSPLPTL
DSPRTLLLAF APSDARSHPR IFADLRLSYP RSHIIGCSAA GEILDGQPRD HALVATVMHF
AHTELASAQV SVASTREGGA AGRALARELE RPDLRALLVF SSAAAVPSEH IVRGLREVLG
DEVAIAGGVA AGGTRGEHAW VLAKGSLARQ TVAAVGLYGD HLIVGHGGKV GWTDIGPARA
VTRSQGGVLL DLDGRPALDC YREALGASKG LPGHIPVALI GDDGARRWRV VVATDDRQRS
LTLAGGVPAA SRVQFVRTSM AQILASAASA GAAAMESAGR TGPNALGLLV GNTVRHMALG
ENASKEAAVA AEACEGIRLV GCYARGGLSS LTPDESALQI TVLGESPTPR PARQPAPRPA
ASPPRPPAAV ARSAAAPMTA AAAELAVGED TRTVAELKAR VEEAHADVGS GAVPVAEEDA
PPFAVASFFY DAKAKTWSLP TLPALDSPRT LVLAFGAPEL ASTPEVFNRL RETYRRAHVI
GCSSAGEIAA RGVRDHSLAV AVMRFAHTEL ATASVVVGDA AGSFPAGQVL AHKLNEPGLR
AVVLLTEGLE ISGSELLRGI QSVIDDEVVV LAGGLAGDGL RFQRTWVLCG DAVQSSLVTA
VGLYGDHLSV GQGAEGGWRP RGPSAIITRS AGNVLYELDN VRALDWYRER LGPQGAKLPA
TGLMFPLGLD PHDDGEATLV RSLLAIDETA GSLSFAGDMP QGTRVHLLGA SSTQLVGGAR
TAARIAAEDL EVGGGPMLGL LVSAVGRRVV LGDRAVAEVE AAAATLPEGC EAVGLYAYGA
FSGFRERGSE VHNQTFSVTL LAESSEPLTK PTAAAVSASG SMAHGQGLTP ARSGGQFASN
TPASGVGMAV AAGSNFELSW RDVGGVRLIE LAGQLNEDFD SDAVAALMRG TTVLDLAHIE
RVSSYGVSAW LQMLEHAAPR LKHLYMARCA EFLVGQMMRF PEMCGDAQLL SFVAPYTCDN
CGNDFVHTLD CNRDADELRA AAPPSVPCSL CDAPARFDAD AERYREFFAP HLGEAAPRAV
RRALSPHARA DSAAEDSLEE RAAAERPVPA PALARSSSAR TNALRGAGIG VLVTALLGAC
LYWLGSRPSG PGAGEDPRQV PAIARADAGS AAASDPPLAI DAARAKTPPP AWFERAVIGV
GDELFVIGKS GPRESAYSAA EAAYRDAVRA LLEHMVSGLR GAPAHAYLRT HLGPLGADAS
DAAEQRLARA VARFETQLGA LATLQRVDTL ADYHADEGDP AARGTSLAVR YRLPRASYEQ
ALALYRAAET GWGMSVVTVF PLLAAELPPQ GELLVVEVSP RSPAARAEIE PGDLILRAEQ
RYVSSLEEYA AIASGRDADD DTADADEHHP RHELELELLR DGERMVKRLK RR
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