Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3737 |
Symbol | |
ID | 8546127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 5141471 |
End bp | 5142316 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646388404 |
Product | response regulator receiver protein |
Protein accession | YP_003268130 |
Protein GI | 262196921 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00249462 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.888945 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGACC CGAACCGCAG CGGAGAGGCG CGTGACCAGG CCGCTGCCGG GCCCGGAAGC CAGAGGGGAG ACACCTCGGA CGCAGGTCAG CATGCACCTT CTGTCGAACG CTTCATACGA CAAGACGCGT CCGAATCCCT GTCATTTACC GTCGCCTATC ACGACGCTGC CGACTGGCTC GCCGACTTCG ACGCTCAGCT CTGTGAGGGC GGCCTCGAGC TGCCGCTGAG CGAAGCGTGC GAGCAGGGCG CCTCCGCAGC GCTGCACTTC GCGTGTCCGG ATCTGCTGCA GACGCTGTCC GCGGTCGCGC AGCTCGAGCC GCGCAAGCGC AGCCGCCGCC AGCCTGAAAC CGCCGCCGTG GCCCGCATCG ACGCGGCGTC TCGCGCGCAG CTCGCCGAGG CCGCGGCCGC CATCCGCGAG CGTGATCGCG CGTGGCTGGC ACCGCTGGTG CGCGTGCTGG TCGTCGAGGA CAATCTCCAC GCCGCGCAGC TCCTCGAAGA CGGGCTGCAT CTGGCGGCGC GGCGCTCGTT TGGCAATCGG GTAGCGTTTC ATGTGCCGCG AGTGACGACG CGCTCCGAGG CCATCGCATT CCTGCGCCGC AAGCCGGTCG ATGCGCTCAT CATCGACATG TATCTCCAGG GCGAGACCGG AGCCGCGCTC ATCGAACAGC TCCGCGCGGA GCCGGCGCTG GCCAAGCTGC CCGTCATCGT GATCTCGGCC GGCCATGACG CGCACACGCG CGACACGGCG CTGAACGCTG GCGCCGATCT GTTCCTCACC AAACCGCTGC GCATGCGCGA ACTCGCGCGC GCCATCGCCG ACGCGCTCGA ACTCGAACTC GACTGA
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Protein sequence | MRDPNRSGEA RDQAAAGPGS QRGDTSDAGQ HAPSVERFIR QDASESLSFT VAYHDAADWL ADFDAQLCEG GLELPLSEAC EQGASAALHF ACPDLLQTLS AVAQLEPRKR SRRQPETAAV ARIDAASRAQ LAEAAAAIRE RDRAWLAPLV RVLVVEDNLH AAQLLEDGLH LAARRSFGNR VAFHVPRVTT RSEAIAFLRR KPVDALIIDM YLQGETGAAL IEQLRAEPAL AKLPVIVISA GHDAHTRDTA LNAGADLFLT KPLRMRELAR AIADALELEL D
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