Gene Hoch_3604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3604 
Symbol 
ID8545994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4959472 
End bp4960836 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content68% 
IMG OID646388273 
Productphosphoglucosamine mutase 
Protein accessionYP_003267999 
Protein GI262196790 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01455] phosphoglucosamine mutase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.623174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000672034 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCATCGC GAAAATACTT CGGCACCGAT GGCATCCGCG GGATCGCCAA CCTCGAACCC 
ATGACCTCCG AGACCGTGAC CCGCCTGGGC ATGGCCGTGG CCGCGCGCCT CCGCCAGAGC
CTGGGACGGC CGCCGCGCGT CGTCATCGGC AAGGACACGC GCCTCTCGGG CTACATGTTC
GAGACCGCGA TGGCCACCGG CATCGTGGCC ATGGGCGCCG ACGTCTGGAT CACCGGACCG
CTGCCCACGC CGGGCATCGC GTTCATCACC TCGTCGATGC GCGGCGACGC CGGCGTGGTC
ATCAGCGCCT CGCACAATCC CTTCCAGGAC AACGGCATCA AGCTGTTCTC GCGCTCGGGC
TACAAACTCG ACGACAACGT CGAGCTCGAG ATCGAGCGGC TCATGGACTC GCCCGAGCTC
AGCTCGCTGC GCGCCAAGCC CGAGGAAGTC GGCTACACCA CGCGCATCGA GGACGCGCGC
GGGCGCTACG TGGTGCACTG CAAGAGCACC TTCCCGGACG ACCTCACCCT CGACGGCATG
CGCATCGTGG TCGATGGCGC CCACGGCGCC GGCTACCGCG TGGCCCCGGC GGTGTTCGAG
GAGCTGGGCG CCGATATCAT CGAGATCAAC ACCAAGCCCA ACGGCCGCAA CATCAACGAC
AACGCCGGCG CGCTGCACCC CAAGGGTCTG TGCGCCCAGG TGCTCACCCA CGACGCCCAC
CTGGGCATCG CGCTCGACGG CGACGCCGAC CGCGTGGTCA TGTGCGACGA GAACGGCCAG
GTGATCGATG GTGACGCCAT CATGGCGCTG TGCGCGACCC GCATGCTGGC CGCCGGCAGC
CTGGCCAAGA ACACCCTGGT GGCCACGGTG ATGTCCAACC TGGGCATGGA GCGCGCGGTC
AAAGCCGCCG GCGGCCAGGT GGTGCGCACC AACGTCGGCG ACCGCTACGT GGTCGAGGCC
ATGCGCAAAG GCGGCTACAA CTTCGGCGGC GAGCAGTCGG GACACCTGGT CTTCCTCGAC
CACATGACCA CGGGCGACGG CATCATCGCG GCGCTGCGGG TGCTGTCGAT CATGATGCGC
GAGGGCAGCC CGCTGAGCGA GCTGGCCCAG GTCATGACGC GCACGCCGCA GGTGCTCATC
AACGTCAAGG TGGCGCGCAA GGTGCCGCTG GCCGATCTGC CCAAGGTGCA GAAGCTGATC
AAGAGCGTCG AGGCCGAGCT GGGCGAGGAG GGCCGCGTGC TGGTGCGCTA CAGCGGCACC
GAGTCCAAGG CCCGGGTCAT GATCGAGGGC CCGAGCGAGG GCCGGATTCG GCCCTTCGCC
GAACAGATCG CCGCAGAGCT CGCCGAACAC TGCAAAAACG CCTGA
 
Protein sequence
MASRKYFGTD GIRGIANLEP MTSETVTRLG MAVAARLRQS LGRPPRVVIG KDTRLSGYMF 
ETAMATGIVA MGADVWITGP LPTPGIAFIT SSMRGDAGVV ISASHNPFQD NGIKLFSRSG
YKLDDNVELE IERLMDSPEL SSLRAKPEEV GYTTRIEDAR GRYVVHCKST FPDDLTLDGM
RIVVDGAHGA GYRVAPAVFE ELGADIIEIN TKPNGRNIND NAGALHPKGL CAQVLTHDAH
LGIALDGDAD RVVMCDENGQ VIDGDAIMAL CATRMLAAGS LAKNTLVATV MSNLGMERAV
KAAGGQVVRT NVGDRYVVEA MRKGGYNFGG EQSGHLVFLD HMTTGDGIIA ALRVLSIMMR
EGSPLSELAQ VMTRTPQVLI NVKVARKVPL ADLPKVQKLI KSVEAELGEE GRVLVRYSGT
ESKARVMIEG PSEGRIRPFA EQIAAELAEH CKNA