Gene Hoch_2497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2497 
Symbol 
ID8544884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3436791 
End bp3437657 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content71% 
IMG OID646387197 
Productprotein-(glutamine-N5) methyltransferase, release factor-specific 
Protein accessionYP_003266926 
Protein GI262195717 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.327963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.48077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAGA CCTGGACCAC GCTCAAGGTG CTCGATTGGA CGGCCAATCG CTTCACACGC 
GCGGGCATTC CATCGCCGCG GCTCGAGGCC CAGGTGCTGC TCGCCCACGT GCTGGGCTGC
GATCGCACAC GCTTATATAT GGACTTCGAA AAACCGCTCG GCGACGACGA GTTGGCCTCC
TACCGCGGGC TCATCCAGCG CCGCCTGAGC GGCGAGCCCG TGGCCTACCT GGTCGGCCAT
CAGGAGTTCT GGTCGCTGTC GTTTCAGGTC GGCCCCGAGG TGCTCATCCC GCGCCGCGAC
ACCGAGACCG TGATCGAGCA GGTGCTCGAC CAGATCGGCG CCCGCGACGC GGCCCTGCGC
ATCGCCGACG TGGCCACGGG CTCGGGCGCC ATCGCCATCA CCCTGGCGCA CGAGCTGCCC
TCCGCGAGCG TGATCGCCAC CGACCTGTCG CAGGCAGCGG CCGCCATGGC TACAGACAAC
GCCGCGCGCA ACCAGGTCGA TGCCCGCGTG GAAGTGCGTG TCGGCGATCT GCTGGCGCCG
CTGGCGGGCG AGGCGCCCTT TGACGTGCTG GTCTCCAACT TGCCCTACGT GCCCGCCGGC
GACATCGAGG GCCTGGCGCC CGAGGTCCAG CGCGAGCCGC GCCTGGCCCT CGACGGCGGC
GACGACGGCT TGCACCTGCT GCGCCGCCTG ATCGCGGACG CGCCGGCGCT GCTCAGCGAC
ACCGGGCTGC TGGTGCTCGA GCACGGATTC GACCAGGACG CGGCCGTGCG CGCGCTCATC
GACGCCACCG GCGCCTTCGA GCCGGCGCAG ACGCGGCTCG ATCTCGGTAA ACAGCCACGC
GTGAGCTGGG CCAGGCGGCA GCCTTGA
 
Protein sequence
MSETWTTLKV LDWTANRFTR AGIPSPRLEA QVLLAHVLGC DRTRLYMDFE KPLGDDELAS 
YRGLIQRRLS GEPVAYLVGH QEFWSLSFQV GPEVLIPRRD TETVIEQVLD QIGARDAALR
IADVATGSGA IAITLAHELP SASVIATDLS QAAAAMATDN AARNQVDARV EVRVGDLLAP
LAGEAPFDVL VSNLPYVPAG DIEGLAPEVQ REPRLALDGG DDGLHLLRRL IADAPALLSD
TGLLVLEHGF DQDAAVRALI DATGAFEPAQ TRLDLGKQPR VSWARRQP