Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0485 |
Symbol | |
ID | 8542865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 660079 |
End bp | 660969 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646385281 |
Product | phosphatidate cytidylyltransferase |
Protein accession | YP_003265018 |
Protein GI | 262193809 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.468496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.270434 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCAAGC TCGGCAATCT CGCATCCCGC TTCGCGGTCG CCCTCATCGC CGTCCCGGCC CTGTCGTTCA TCTTCTACAG TGAGAACCCG GTCTACACTT GGCTGTTCAT CAGCGCCGCC AGCCTGATCG CGTCGCACGA GTTCTTCTCG ATGACGCTGA GCGACCGCGG CGACCGCAAC GCCAGCCTGC TGCTCAGCTT CGTCGCCGCC AGCGCCCTGT TCTGGCTCGA CCCGGCCGCG CTCGCGGCCA GCACCGACAA CCGCGCGCTG ATGGCCAGCA GCGGGCCGCT CGCCATCTTC CTCGGCACCG TGCCCATCGC CATCTATTAC TTGTTCCGCT TCGGCGATGT GAAGACCGTG GCCGCGCGCG CGGCGGCATC GATCACGGGC ATCTTCTACG TCGGGCTGCT GTTCTCCTTC GTGCCCCTGG TCAAGCGGGA TTTCGGACCG GACGGCGGCG ACGTCATGGT CTTCCTGCTG CTCATCGCCT GGATGGGCGA CACCGGCGCG TACTTCGCCG GCCGCTTCCT CGGCAAGCGC AAGCTGTACC CGGCGGTGAG CCCCAACAAG ACCTGGGCCG GCGCGATCGG CGGCCTGCTG ATGTCGCTGC TGTCGTGCGC GGTGATGAAG CTCGTGGTCA TCGAGCTGCG CGACCCGCCG AGCCTGATGC ACGCGCTCAC CTGGTTCGAT GTCTGCGCCC TGGCCATCCC GGGCGCCATG CTGGGCCAGA TCGGCGACCT CTTCGAGTCG CTGATCAAGC GCTCGACCGG CGTCAAAGAC TCCGGCAGCC TGCTGCCCGG CCACGGCGGC ATCCTCGACC GCATCGACGC GGTCCTGTTC ATCACGCCCT ACGTCTACCT GTACCTGACC CTGCGCGGCT TCGGCGGCTG A
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Protein sequence | MPKLGNLASR FAVALIAVPA LSFIFYSENP VYTWLFISAA SLIASHEFFS MTLSDRGDRN ASLLLSFVAA SALFWLDPAA LAASTDNRAL MASSGPLAIF LGTVPIAIYY LFRFGDVKTV AARAAASITG IFYVGLLFSF VPLVKRDFGP DGGDVMVFLL LIAWMGDTGA YFAGRFLGKR KLYPAVSPNK TWAGAIGGLL MSLLSCAVMK LVVIELRDPP SLMHALTWFD VCALAIPGAM LGQIGDLFES LIKRSTGVKD SGSLLPGHGG ILDRIDAVLF ITPYVYLYLT LRGFGG
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