| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0404 |
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| Symbol | |
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| ID | 8542784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 555452 |
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| End bp | 557281 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646385201 |
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| Product | ABC transporter related protein |
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| Protein accession | YP_003264938 |
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| Protein GI | 262193729 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGCCA AACGACGCGG CGCAGCGCTC GACGGGCTGC GCCAGTATCT CGGCGTGTTT
CGCTACAGCG GACGCGCCAT CTCCCTGGTC TGGTCCACCA ACCGACCGCT CACCGTCGGC
CTCGCCCTGC TCAGTCTGAT CAACGGACTG CTGCCCGCGG CCGTGGCCTA CGTCGGCAAG
CTGATCATCG ACGCCGTGGT CCAGGCCGCC ACCACCGGCG CCGTCGCCGA CCGCGATCAG
GCGCTCGTGT ACGTCGCCGC CGAGCTGGTG CTTGTGGTGC TGCTGGCCGC CGGCCAGCGC
GGCATCGGCA TCTTCCAGTC GCTGCTGCGG GCGCAACTCG GACACCGGGT CAATTACATG
ATCCTCGAGA AGGCGCTGTC GCTCGAGCTG ACGCACTTCG AGGACTCGGA GTTCTACGAC
AAGATGACGC GCGCGCGCCG CGAGGCCTCG TCGCGGCCGC TCAGCCTGGT CATGCGCACC
TTCGGGCTGA TCCAGAACGG CATCTCGCTG GTCACCTACG GCGCGCTGCT GCTGTCGTTC
TCGGGCTGGG CCGTGGGCGT GTTGCTCGTC GCCGCGCTGC CCGCGTTCTT CGCCGAGACC
CGCTACTCGG GCGAGGCCTT TCGCCTGTTC CGCTGGCGCA CGCCCGAGAC CCGCCAGCAG
ATGTATCTCG AGGCTGTGCT GGCGCGCGAG GACTACGCCA AAGAGGTCAA GCTCTACAAC
CTGGGCCCGC ATCTGCTCAG CCGCTACGAC GACATCTATC AGCGTCTGTA CGCCGAGGAT
CGCAGCCTCA CCTGGCGCCG CGGCGTCTGG GGCTACGTGC TCGGCCTGCT GAGCACGGCC
GCGTTCTACG GCGCCTACGG CTGGATCGCG CTGGCGACCA TGAGCGGCGA CATCACGCTC
GGCGACATGA CCATGTACGT GATGGTCTTC AAGCAGGGCC AGAGCGCGCT GTCGTCGATC
CTGTCCGCCA TCGGCGGCCT GTACGAGGAC AATCTGTATC TGTCCAATCT GTTCGAGTTC
GTCGAAGAGG CTGTGCCCCA GGCCGCGGGC ACGCGCAGCG AAGGCCCCGA GCCGGGCGAC
GGCGTGCGCT TCGAGAACGT GTCCTTCGTC TACCCGGGCG CCGACAAACC CGCGGTCGAA
AACATCTCGC TGCACATTCA ACCCGGCAGC AAGCTGGCGC TGGTGGGCGA GAACGGCTCG
GGCAAGACCA CGCTGATCAA GCTGCTCACG CGCATGTACT CGCCGAGCAC GGGGCGCATC
TTGCTCGACG GGCTCGACCT CGCCGAGTGG GATCCCGACG CTCTGCGCGC GCGCATCGGC
GTCATCTTCC AGGACTTCGC CCGCTACCAG TTCATCGTCG GCGAGAACAT CGGCGTCGGC
GAAGTCGACG CGGTGAACGA TCGCGAGCGC TGGGAAGAGG CCGCGACCAA GGGGCTGGCG
CGGCCGATCA TCGACGAGCT GCCCGAGGGC TACGACACCC AGCTGGGGCG CTGGTTCAAG
GGCGGGCGCG AGCTGTCGGG CGGACAGTGG CAGAAGATCG CGCTGGCGCG CGCGTTCATG
CGCAAACGCG CCGATATCCT GGTGCTCGAT GAGCCCACCG CGGCCATGGA CGCCGAGGCC
GAGGTGCTCA TCTTCGAGCA CTTCCGCGAG ATCACCAAAG ATCAGATCGC CGTCATCATC
TCGCACCGCT TCTCGACCGT GCGCATGGCC GACCACATCA TCGTGCTCAA TGGCGGACGC
GTGGTCGAAT CGGGCAGTCA CGAGGCGCTG ATGGAGCGCG ACGGCCCCTA CGCGCGCCTG
TTCTCGCTGC AGGCCGCGGG CTATCGCTAG
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| Protein sequence | MTAKRRGAAL DGLRQYLGVF RYSGRAISLV WSTNRPLTVG LALLSLINGL LPAAVAYVGK
LIIDAVVQAA TTGAVADRDQ ALVYVAAELV LVVLLAAGQR GIGIFQSLLR AQLGHRVNYM
ILEKALSLEL THFEDSEFYD KMTRARREAS SRPLSLVMRT FGLIQNGISL VTYGALLLSF
SGWAVGVLLV AALPAFFAET RYSGEAFRLF RWRTPETRQQ MYLEAVLARE DYAKEVKLYN
LGPHLLSRYD DIYQRLYAED RSLTWRRGVW GYVLGLLSTA AFYGAYGWIA LATMSGDITL
GDMTMYVMVF KQGQSALSSI LSAIGGLYED NLYLSNLFEF VEEAVPQAAG TRSEGPEPGD
GVRFENVSFV YPGADKPAVE NISLHIQPGS KLALVGENGS GKTTLIKLLT RMYSPSTGRI
LLDGLDLAEW DPDALRARIG VIFQDFARYQ FIVGENIGVG EVDAVNDRER WEEAATKGLA
RPIIDELPEG YDTQLGRWFK GGRELSGGQW QKIALARAFM RKRADILVLD EPTAAMDAEA
EVLIFEHFRE ITKDQIAVII SHRFSTVRMA DHIIVLNGGR VVESGSHEAL MERDGPYARL
FSLQAAGYR
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