Gene Hoch_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0022 
Symbol 
ID8542392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp26379 
End bp27113 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content68% 
IMG OID646384810 
ProductGeneral secretory system II protein E domain protein 
Protein accessionYP_003264557 
Protein GI262193348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTA AGCGCATCGG AGAGATCCTC GTCCAGGCTG GAGTTCTGGA CGCCGAGGGA 
CTCAAAACAG CCCTCCTCGA ACAGCGCCGC TGGGGCGGAC CGCTCGGCCG CACGCTCGTG
GACCTGGACC TCATCACCGA GGAAGCCCTG GTGGATGCGC TGAGCAAGCA GCTCAACTTC
CCCACGGTCG ATCTCGACAC CGTGGACGTC GCCCCCGAAG TGCTCGAGCT GGTGCCCGGT
GAGCTGTCGG TGCAGCACCA CATGATGCCG TTCAAACGCG AGGGCAAGTT CCTCGACGTG
GCCATGAGCG AGCCCACCAA CCTCGGCATC ATCGACGAGC TGCGCATCCG CACCCAGCTC
AACGTGCGGC CGTATCTGGC CGGGCCCAAG ATGATCGAGC GCGCGCTGCA GCGCTATCAC
GGCGATATCC TGCCCGACAA AAGCGACAAC CCGCGCACGG CCACCGGCGC GCCCGCGGCC
CAGGCGCGCA GCGCGAACCG CCGCGGCGAG GCCGACGCCG TTCAGCCGCA CACCGGCTCC
AACCCGGCCC TGCGCCATCA GTACGGCCCG CGCAGCGCGC AGGCCCGCGA GGAGGAGATC
CGCTCGCTGC AGGAGCGCAT CTCGCAGCTC GAGGCGCTGC TCAGCCGCGA TGAGGACGTG
CTGCGCAAGG TGCTGAGCCT GCTCGTGGAC AAGGGTATTG CCACCCGCGA AGAGATCCTC
GAGCGCCTGG GTTGA
 
Protein sequence
MARKRIGEIL VQAGVLDAEG LKTALLEQRR WGGPLGRTLV DLDLITEEAL VDALSKQLNF 
PTVDLDTVDV APEVLELVPG ELSVQHHMMP FKREGKFLDV AMSEPTNLGI IDELRIRTQL
NVRPYLAGPK MIERALQRYH GDILPDKSDN PRTATGAPAA QARSANRRGE ADAVQPHTGS
NPALRHQYGP RSAQAREEEI RSLQERISQL EALLSRDEDV LRKVLSLLVD KGIATREEIL
ERLG