| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1600 |
|---|
| Symbol | |
|---|
| ID | 8534758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 1742608 |
|---|
| End bp | 1743333 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646383989 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003263477 |
|---|
| Protein GI | 261856194 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.400677 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA AAATCTTAAC GCTGCTCACA GTAGCAACCG CTCTGAACCT GCCGGTAATC
AGTGCAGCGG TCCAAGCCGA TACGTTTACC GGCAATATCA ACGTGGCCTC TAAATATATT
CTTCGAGGTA TTACCAATTC ACCAGAAGAT GACAATGCTG CATTGCAAGG TGGATTTGAC
TATTCCCTAG ACAATGGCCT TTACGTTGGC TACTGGGGTT CGTCACTTGG ATATTCTGAT
CCGGGTAAAT CCAACGGTTT CGAAAATGAC TTCTATGGTG GTTACAACGG TAGTATTGGT
GACTTTCATT ACGGAGTCGG CGTCGTTCAA TACGCCTACG TCAACATTTC CAACTCTAAT
GGCATAGAAG GCTACGGCAG CGTCGGTTAC GGCCCAGTCA CTTTTGGCGC CAAGACGCTG
TTGAAAGACG TGGCATGGGG CAACAAGGGG GACACCTTCT GGACCCTAGA CTACAGCACG
GCTTTGCCCA AAGACTTTAA ATTTGGGACA ACGATCGGTT ACTACACCTA CAAGAATAGT
GGCACGTACA TAGCATCAAC CCCCGAGAAA AACGCCTTCC GCTACGCTGA TATCAACCTG
TCACATCCAA TCGGAAAAAC AGGGGCAAAC GTTAGCATGC ACTACATTAT TGGCGGCAAA
GATCGCAATG GTACTAAGCA AAAGAACGCC ATTTTCTTCA ACCTTGGCTA CAACTTCGAC
CTATAA
|
|---|
| Protein sequence | MKKKILTLLT VATALNLPVI SAAVQADTFT GNINVASKYI LRGITNSPED DNAALQGGFD
YSLDNGLYVG YWGSSLGYSD PGKSNGFEND FYGGYNGSIG DFHYGVGVVQ YAYVNISNSN
GIEGYGSVGY GPVTFGAKTL LKDVAWGNKG DTFWTLDYST ALPKDFKFGT TIGYYTYKNS
GTYIASTPEK NAFRYADINL SHPIGKTGAN VSMHYIIGGK DRNGTKQKNA IFFNLGYNFD
L
|
|---|
| |