| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0782 |
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| Symbol | |
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| ID | 8533920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 844028 |
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| End bp | 845314 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646383169 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003262678 |
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| Protein GI | 261855395 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00204407 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGA CCAAACCTCA ACCCTCAGCT GGCACCGAAA ACGCCCGAAC GCCGATTTTC
ATGCAAAAAT CCGGCGGCAA CCGATGGAAA CGCTGGCTGC TCATCGTGCT GGCCGTCGCC
GTTCTGGTCG CCGGATATAT TCAGTTTAAA GGTAAGGAAA CCAACACGCC ACAATACGTG
ACCCAGCCTG TCCAACGCGG CGATCTCACG GTTGAAGTGA CCGCGACCGG CACATTGGCT
CCGACCAATC AGGTCGACGT CGGGATCGAG GTTTCCGGAA CCATCAAAGA AGTGCTGGTC
GACTACAACG ATAAGGTGAA GGTCGGTCAA CCCCTCGCCC TGCTCGACCC GACCAAGCTC
GAAGCCCAGT TGCGACAGTC CACCGCCGCA CTCGATGCGG CGCGCGCCAA GGTGCAACAG
GCCGAAGCCA CGGTGCAAGA ATCCAAGACC CAGCTCGCTC GACTGAAAAA TGTGCAGAAG
ATGAGCGGCG GCAAGGTGCC CTCCAAACTC GAATTCGACA AAGCGCAGGC TACCTATAAC
CGGGCCAAGG CAGACCTTGC CAGCGCGTGG GCCAGCGTCG TGCAAAGCGA GGCGGTGCAG
AACGCCAACC GCACCGATCT TTCCAAAACC GTTGTACGTT CGCCCATCAA TGGCATCGTG
CTGAATCGCA ACGTGGAACC GGGCCAGACC ATCGCGGCCT CATTCCAGGC ACCCGTCCTG
TTCACGCTGG CAGAAGACCT CACGCAGATG GAGTTGCAGG TCGATGTCGA TGAGGCAGAT
GTCGGTCAGG TCCATGTGGG ACAGCCCGCC CGTTTTACAG TTGATGCTTT TCCGGATCGA
AATTTCGATG CAAAAGTCAC TCAGGTGCGT TACGGCTCGC AAACCGTTTC CGGCGTGGTG
ACCTACAAAA CCATTCTCAA GGTCGACAAT CGGGATCTTC TGCTGCGTCC TGGAATGACG
GCCACCGCGC ATATTTTGGT CAACGAAGAC AAGAACGCGC TCCTTGTACC GAATGCGGCA
CTGCGCTTTT CACCGCCTGT GTCGACAACC ACGAAAAGCA GCGGCGGCCT GATCTCCAAT
CTAATGCCAA GGCCCCCGAG TTCCTCTCAG AATTCGGTGC AGGCAGCGAC AGGCAAGGAG
CAACGCGTTT GGGTTTTGAA GGACGGGCGT CCTGAACCGA TCGATGTCAT GACCCAGCAA
ACAAACGGCA TCATGACCGC CATTACAGAA GGTGCTCTGC AACCCGGCAC ACCGCTGATT
GTCGACATGA ACGAGCAGAC AAAATGA
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| Protein sequence | MSATKPQPSA GTENARTPIF MQKSGGNRWK RWLLIVLAVA VLVAGYIQFK GKETNTPQYV
TQPVQRGDLT VEVTATGTLA PTNQVDVGIE VSGTIKEVLV DYNDKVKVGQ PLALLDPTKL
EAQLRQSTAA LDAARAKVQQ AEATVQESKT QLARLKNVQK MSGGKVPSKL EFDKAQATYN
RAKADLASAW ASVVQSEAVQ NANRTDLSKT VVRSPINGIV LNRNVEPGQT IAASFQAPVL
FTLAEDLTQM ELQVDVDEAD VGQVHVGQPA RFTVDAFPDR NFDAKVTQVR YGSQTVSGVV
TYKTILKVDN RDLLLRPGMT ATAHILVNED KNALLVPNAA LRFSPPVSTT TKSSGGLISN
LMPRPPSSSQ NSVQAATGKE QRVWVLKDGR PEPIDVMTQQ TNGIMTAITE GALQPGTPLI
VDMNEQTK
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