Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0777 |
Symbol | |
ID | 8533915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 837018 |
End bp | 838718 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 646383164 |
Product | glycoside hydrolase family 57 |
Protein accession | YP_003262673 |
Protein GI | 261855390 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACACA AGAAGTTACC CGTTGTTCTG TGCTGGCACA TGCATCAGCC GGAATACAGA GACCCTCGGG ATAAAATCTA CCAGCAGCCG TGGACCTATC TGCACGCCAT CAAGGACTAT GTCGATATGG CAGCGCACCT AGAGCGTCAT CCCGGCGCGC GTGCGGTTGT CAATTTCGTA CCCATCCTGC TTGAGCAACT CGACGATTAC TCGGTTCAGA TTGCGCAATA CCTTGAAACA CGTGAAATTT CCATGCTGCG TGACCCGTTG TTGGTTGCTT TGGTCGAGCC TGAAAAGATC ACAGACCCCA CAGCGCGCAT GACTGCCGTT CGGGCCTGCA TGCGTGCCAA TGAAGATCGA CTGATCCGCC GTTTCGAGCC ATTCAAGGAT CTGGTCGATT TGGCGCGTTC AATCTCTGTA AATACGGAGA ACGGCGATTA TCTGAGCGAT CAGTTCATCG CTGATCTGGC GGTGTGGTAT CACCTGGCCT GGATGGGCGA AACGGTTCGT CTTGAAAATA CACTCGTTAA ACAGCTCATG GCCAAGCCTT TGGGCTTTAA TGCCGACGAG CGCGTCCAGC TGCTGGCACT CATCGGTTCC CTGATTGCTG GGATTTTTAC TCGTTACCGG GCATTATCGG AAGGAGGGCA GGTTGAGCTG TCCATGACGC CTTATGCGCA TCCGATCATG CCGCTGCTGC TCGACATAAC CGCTGGCAAG CAAACCTGCC CGCACGATCC GCAGCCGCAG CAGGTGAGTT ATCCTGGCGG TTCAGATCGT GTGCAGTGGC ATTTGCAACA TGGCTTGGAT GTATTCAAGC GCTTTTTTGG TGTTCATCCC ACAGGTTGCT GGCCCTCTGA AGGTGCGGTT TCCGAGCCGA CGGTGCATGA ATTGGCTAAA GCCGGTTTCA CCTGGTTGGC CAGTGGCGAT CAAGTGCTGA GTCACTCATT ACAAAAGCAG AAGATGGTTG AAAGCGGTTG CCGTCATCGG GTGTGGCAGT TCGATGCTTT GTCCCCCGCA CTCTTTTTCA GGGATGACGG ACTCTCCGAT CTGATCGGAT TCGACTACCA AAAATGGCAT GCAGATGATG CTGTTGCCGA TTTTATCGCC CATTTAATGA AGATTCGTCA CGATTGTCAG GATGACGATG CTGTGGTTTC GATCATTCTC GATGGTGAAA ACGCCTGGGA GTTTTACCCC CACAATGGTT ATTGGTTTCT GGATGCCTTG TACAAAGGCT TGAGTACGCA TCCAGATATT GAACTCACCA CTTTCTCTGA GGTGGTAACA AAGACCTATC AGCGTAAAAC TTTGCAGCAT CTGGTTTCTG GTAGCTGGGT TTACGGGAAT TTGACCACTT GGATTGGAAG CCCCGCCAAA AACCGGGCTT GGGATATGCT GATCGATGCA CGATTGGCAT TTGTGAAAGC ACAGTCCGCA GGGCAGTGGG ATGCCCAAAC CGAGGAGCGG AATATCCAGC AACTGGCCAT CTGCGAAGGT TCGGACTGGT TTTGGTGGTT TGGCGATTAC AACCCGGGCG ATGCCGTTCG AGATTTCGAC CACTTGTACC GCTTGCAGTT GACCCGATTG TACGAGCTTA TCGGCGAAGA TGTGCCGGCC AATCTGGCTG TGCCGCTGTG TCTTGGCGTC GGAGAAAATT CGACCGTGGA AGCAGGTGGT GTGATGCGAC GTGGCCAATA A
|
Protein sequence | MKHKKLPVVL CWHMHQPEYR DPRDKIYQQP WTYLHAIKDY VDMAAHLERH PGARAVVNFV PILLEQLDDY SVQIAQYLET REISMLRDPL LVALVEPEKI TDPTARMTAV RACMRANEDR LIRRFEPFKD LVDLARSISV NTENGDYLSD QFIADLAVWY HLAWMGETVR LENTLVKQLM AKPLGFNADE RVQLLALIGS LIAGIFTRYR ALSEGGQVEL SMTPYAHPIM PLLLDITAGK QTCPHDPQPQ QVSYPGGSDR VQWHLQHGLD VFKRFFGVHP TGCWPSEGAV SEPTVHELAK AGFTWLASGD QVLSHSLQKQ KMVESGCRHR VWQFDALSPA LFFRDDGLSD LIGFDYQKWH ADDAVADFIA HLMKIRHDCQ DDDAVVSIIL DGENAWEFYP HNGYWFLDAL YKGLSTHPDI ELTTFSEVVT KTYQRKTLQH LVSGSWVYGN LTTWIGSPAK NRAWDMLIDA RLAFVKAQSA GQWDAQTEER NIQQLAICEG SDWFWWFGDY NPGDAVRDFD HLYRLQLTRL YELIGEDVPA NLAVPLCLGV GENSTVEAGG VMRRGQ
|
| |