| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3805 |
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| Symbol | |
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| ID | 8532231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 4200819 |
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| End bp | 4202477 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | transcriptional regulator SgrR |
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| Protein accession | YP_003261146 |
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| Protein GI | 261823040 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.397454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCCC CTCGATTGCA ACAACAGTTC ATCCGCCTGT GGCAACACTT TCAGGGACAA
ACCACAGACA CCACGCTGCA AGAGCTGACG GGGGTACTGA ACTGCTCACG CCGCCATATC
CGTTCATTGC TGAATGCGAT GCAGCAAGCA GGCTGGCTCA TCTGGCAGGC AGAAGCGGGA
AGAGGAAAAC GCTCGCAGCT CTCCTTTGTG TATACCGGAT TAGCCCTACA GCAACAGCGT
GCCGAAGATT TGCTAGAACA GGATCGCATT GAGCAACTGG TGCAGTTGGT CGGTGACAAA
GAAGCGGTGC GCCAGATGCT ATTGGCTCAC CTTGGGCGGA GTTTCCGACA AGGGAAGCAT
ATTCTGCGCA TCCTCTATTA CCGCCCGTTG CGCAATTTAT TGCCCAGTTC AGCACTGCGG
CGTTCGGAAA TGCATATTGC GCGACAAATC TTTAGTGGAT TAACCAACAT AAATGAGGAA
AATGGGGAAC TAAAGCCCGA TCTGGCTCAT CATTGGCAAG GCCTATCTCC CCTGCACTGG
CGCTTTTATC TGCGTCCGGC CATCCGTTTT CATCACGGTC GTGAACTCAC GATGGACGAC
ATCACCACAT CGTTATCACG GCTCACTCCG CTTCCGCTCT TCTCCCATAT TGAAGCGGTG
ACCTCACCGA TGCCGTTTGT GATTGATATC AGGCTGAGCA CCCCAGATAA ATGGCTGCCG
TGGCTCCTGG CCAGCGTACA CGCCATGATT TTGCCGCAGG AGTGGCAAAC GCTGCCGAAT
TTCGCCCAAC ACCCGATTGG CACCGGGCCT TACGCGGTGG TACGCAATAA CAGCAGCCAG
TTGAAAATCC GGGCTTTCGA TGACTATTTT GGCTATCGGG CGCTGATTGA TGAGGTCAAC
ATCTGGGTCT TGCCGGACGA GCCAGAAGAA ATGCCAGTGT CTGTCCAATT TCAGTCTGAT
GATTCTCACC ATGAGCAGTT GGAAAGTCGA ATGGAGGAAG GTGGTTATTT CCTGTTATTC
GACAAACGCT CGCCTCTGAA TCAGCGTCCA GAAGCTCTGC AATGGCTCAG GCAGATATTT
AACCCTATTT CGCTGCTCAG CCACGCCAAT ACCAGCAACC AGCGCGACTG GTCGCCCGCC
TATAGCCTGT TGCCACGCTG GCATCATCAT CGTCCCGATA CGCCACAGTC CATTCCAGAT
GGGCTAACCG ATGTTACGCT CACGTTCTAT CAGGAACACC CAGAGTACCG GATATTAAGC
GAGATTATGC GCACGCTGCT GGCGCAACAG GGTGTCACCC TGCACGTTCA AACTATCAGC
TACGAAGACT GGTATCAGGG CAATGCTGAA AGTGATATCT GGTTTGGTAG CCTGAATTGT
TATCTGCCGC TCGAATTCTC TCTGTTCGCC ATGCTTTATG AGCTGCCACT GGTGCAACAT
TGCCTGAATG ACGATCTAGC GACAGACGCA CAACAGTGGC GTAATCACAC GCTCCCGATG
GCGGAATGGA GTGAAAAACT CATCAAAAGT GGGCAACTGC ATCCGTTATT GCATCACTGG
CTGCAACTTC AAGGGCAGCG CAGCATGCGA GGCGTCCGGA TGAATATGCT AGGCTGGTTT
GATTTTAAAT CCGCCTGGTT CGCGCCGCCG GAACGCTGA
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| Protein sequence | MSSPRLQQQF IRLWQHFQGQ TTDTTLQELT GVLNCSRRHI RSLLNAMQQA GWLIWQAEAG
RGKRSQLSFV YTGLALQQQR AEDLLEQDRI EQLVQLVGDK EAVRQMLLAH LGRSFRQGKH
ILRILYYRPL RNLLPSSALR RSEMHIARQI FSGLTNINEE NGELKPDLAH HWQGLSPLHW
RFYLRPAIRF HHGRELTMDD ITTSLSRLTP LPLFSHIEAV TSPMPFVIDI RLSTPDKWLP
WLLASVHAMI LPQEWQTLPN FAQHPIGTGP YAVVRNNSSQ LKIRAFDDYF GYRALIDEVN
IWVLPDEPEE MPVSVQFQSD DSHHEQLESR MEEGGYFLLF DKRSPLNQRP EALQWLRQIF
NPISLLSHAN TSNQRDWSPA YSLLPRWHHH RPDTPQSIPD GLTDVTLTFY QEHPEYRILS
EIMRTLLAQQ GVTLHVQTIS YEDWYQGNAE SDIWFGSLNC YLPLEFSLFA MLYELPLVQH
CLNDDLATDA QQWRNHTLPM AEWSEKLIKS GQLHPLLHHW LQLQGQRSMR GVRMNMLGWF
DFKSAWFAPP ER
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