Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3417 |
Symbol | |
ID | 8531835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3751076 |
End bp | 3752527 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | amino acid permease-associated region |
Protein accession | YP_003260762 |
Protein GI | 261822656 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.595169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAC ATTCTTCCCC CCATAGTGAA CATAAAACCA CTCAGCAGCG TCTCCACGAA AAGGGTTATC ACCAAAGTCT GGGCAACCGC CACGTACAGA TGATCGCGAT TGGCGGCTCC ATCGGCACCG GGCTGTTTCT TGGCGCGGGT GCGCGTTTGC AAATGGCAGG ACCAGCACTA GCGCTGGTCT ATCTGGTTTG CGGCATTTTC TCTTTTTTCA TCCTGCGTGC GCTGGGCGAG CTGATCGTTC ATCGCCCCAC CAGCGGCAGC TTCGTTTCGT ATTCGCGCGA GTTTCTCGGT GAAAAAGCCT CCTACGTGGC AGGCTGGATG TACTTCCTCA ACTGGGCGAT GACCGGGATT GTCGACATCA CTGCCGTCGC ACTCTATATG CACTACTGGG GCACCTTTGC CGATGTACCA CAGTGGCTAT TCGCGCTAAG TGCGCTATCC ATTGTCACGC TGATGAATCT GATTGGCGTG AAGTGGTTTG CCGAAATGGA ATTCTGGTTC GCGTTGATTA AGGTCGCGGC CATCGCCATT TTTCTGGTGG TCGGCACGGT CTATCTTGGC ACCGGCAGCC CGCTAGACGG CAACACGCCC GGCCTGCATC TGATTACCGA TAACGGTGGC CTGTTCCCAC ACGGCATTCT GCCCGCACTG GTGTTGGTTC AGGGGGTGAT ATTTGCCTTT GCCGGTATCG AAATCATCGG AACCACGGCG GGCGAATGTA AAAATCCGGA ACAGATACTG CCGAAAGCGG TCAACAGCGT TATCTGGCGT ATCGGTCTGT TCTACGTCGG TTCTGTTGCG CTATTGGTCT GTCTACTGCC GTGGAACGCG TATCAGGCCG GACAAAGCCC GTTCGTAACC TTCTTCAGCA AACTGGGCGT TCCTTATATC GGCACGATTA TGAATATCGT GGTGCTGTCT GCCGCGCTGT CCAGTCTGAA CTCCGGTCTC TATTCGACGG GTCGCATTCT GCGCTCGCTG TCGCTGGGTG GTTCCGCGCC CGCCTTCCTG TCGAAAATGA GCAACCAGTC CGTACCCTAT ACCGGTATTT TGGTGACGGT CTGCATCCAC ATTATCGGTG TGGTGCTTAA CTACGTAGTG CCGTCACAGG TGTTTGAGAT CGTCCTGAAC ATCGCCTCGC TCGGTATTAT CTGCTCCTGG GCATTCATCA TTCTGTGCCA GATGCAGTTG CGTAAAGCAA TTCGTCAGGG GAAAGCCAAG CCAGTTGCGT TCAGAATGCC TGGTGCGCCC GTAACATCAT GGCTGACGCT GGCTTTTTTA GTCAGTGTGT TAGGGCTAAT GGCGTTTGAT TACCCGAACG GCACCTGGAC AATTGCAACG ATTCCAGTGC TGACAATCAT GTTGATCATC GGCTGGCGCG GGCTGAAAAA GCAGCGTGAC GCGGTGAAAC TTGCCAATCA GCAGGGATCC AGCCTGCGTT AG
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Protein sequence | MTQHSSPHSE HKTTQQRLHE KGYHQSLGNR HVQMIAIGGS IGTGLFLGAG ARLQMAGPAL ALVYLVCGIF SFFILRALGE LIVHRPTSGS FVSYSREFLG EKASYVAGWM YFLNWAMTGI VDITAVALYM HYWGTFADVP QWLFALSALS IVTLMNLIGV KWFAEMEFWF ALIKVAAIAI FLVVGTVYLG TGSPLDGNTP GLHLITDNGG LFPHGILPAL VLVQGVIFAF AGIEIIGTTA GECKNPEQIL PKAVNSVIWR IGLFYVGSVA LLVCLLPWNA YQAGQSPFVT FFSKLGVPYI GTIMNIVVLS AALSSLNSGL YSTGRILRSL SLGGSAPAFL SKMSNQSVPY TGILVTVCIH IIGVVLNYVV PSQVFEIVLN IASLGIICSW AFIILCQMQL RKAIRQGKAK PVAFRMPGAP VTSWLTLAFL VSVLGLMAFD YPNGTWTIAT IPVLTIMLII GWRGLKKQRD AVKLANQQGS SLR
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