| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2696 |
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| Symbol | |
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| ID | 8531099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2952775 |
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| End bp | 2954622 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_003260058 |
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| Protein GI | 261821952 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.187576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAACA GTACAGGATT ACAGTTCACG GTAAAGGTCG GTGCCTTGCC CGAAAGCACC
TTTGCGGTGG TGGATTTTCA GCTCAGCGAG GCCCTGAACC AGCCGTTTGC CCTGTCGCTG
AATCTGGCGA GTGCCTTACC GGGGATCGAC TTTGGCGCGG TACTCGATCA GCCCTGTGAG
CTGCGGGTGT GGTACGAAGG CGAGCTGAAA CGGCGCGTCA GCGGGATTAT CAGCGCCTTT
GCCCAGGGTG ATACGGGCTT TCGCCGGACC CGCTATCAGG CAGAAGTACG CCCGGCGTTG
TGGCGGCTGG GGCTGCGTAC CAATGCCCGC ATCTTCCAGG CACAAAAGCC CGAGGACATT
ATTGGTACGT TGCTGGAAGA GTCCGGCATC ACCGATTACG CCTTTGCATT GCGGCACGAC
CACGCTCCGC GCGAATACTG CGTACAGTAT CGCGAAAGTG ATTTGGCCTT CGTCACCCGA
CTGGTAGCGG AAGAAGGCCT GTACTTCTTC CATGAGTTTG AAGAAGGCAA GCACCGGGTG
GTCTTTGCCG ACGATGCAGG GGCGCTGGCA AAAGGCCCGG AACTGTTCTT CAATCTCGCC
ACGCAGGGTC TGAGCGAAGG CGAATACGTC CGCCGTTTCC GCTATGCCGA AGCGGTCAGC
ACTGCCGAAG TCGCCCTCAA GGATTACAGC TTCAAAACAC CGGCCTACGG ACTGCTACAC
CGCAAGATGA GCGGTGAGCT GGAGCACCAG CGCGAGACTT ACCAGCATTT TGACTATCCG
GGCCGCTTCA AGAAAGACCC GAGCGGCAAA GCCTTTACCG GCTATCGGCT GGATGCGCTG
CGGGCGGGTG CGATGACCGG TTCCGGTGAA TCCAACGCCG CGATGCTGAT GCCGGGCAGC
AGCTTTATTC TGACTGAACA CCCCAATCCG ACGCTCAACG CGGCCTGGCA ACTGGTGGCC
ATCACCCACA GCGGACAGCA ACCGCAGGCG CTGGAAGAAG AAAGCGGCGG CGAACCGACC
ACCTACAGCA ACAGCTTTGA GGTCATCAGC GCCAAATCTA CCTGGCGTGC AGGCCTGCCG
TACAAGCCGA TGGTAGACGG CCCGCAAATC GCCACCGTGG TTGGGCCATC TGGTGAGGAA
ATTTACTGCG ATGAATACGG CAGAATCAAA CTGCAATTTC CGTGGGACCG CTACGGCTCC
AGCGATGACC AGAGCTCCTG CTGGGTGCGC GTCAGCCAGG GCTGGGCGGG CGGCCAGTAC
GGGCTGATAG CCATCCCGCG CATCGGCCAT GAGGTGATTG TCAGCTTCCT CGAAGGCGAC
CCGGACCAGC CGATAGTGAC TGGCAGAACC TTTCATGCCA CCAATCCATC ACCGTACCCA
CTGCCGGCGA ACAAGACACG TACCTCGCTG CGTACCTCAA CGCACAAGGG AGCCGGGTTT
AACGAACTGC GCTTTGAAGA CCAGGCCGGG CAGGAAGAGG TGTTTATCCA TGCCCAGAAG
GACATGAACA CGGTGGTGCT GAACAACCGC AGTACCACCG TGACCGCTGA CCATACCGAA
AACATCGGCG GCAATCAGAC GGTGTCGGTC ATCAAAGACC AGTCCACTGA AATTCAGGGG
CAGCAGACTA TCGCCATTCA TGGCAATCGC AGCACCGTCA TTGGCACAGA GGGTAAGGGA
GAATCGCACG AGTCTATGCA GGTGAAAAAC AACATCCTTA TCCAATCGAA GCAAGGTGGC
ATCCTGATTG CCAACAGCAT CGGTTTTTTC AGTATCAGCG ATGAAGGTGA CATCACCATC
AAGGGCAAAA CCGTCACCAT CAACGGCAAT CGTATCGACC TGAACTGA
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| Protein sequence | MANSTGLQFT VKVGALPEST FAVVDFQLSE ALNQPFALSL NLASALPGID FGAVLDQPCE
LRVWYEGELK RRVSGIISAF AQGDTGFRRT RYQAEVRPAL WRLGLRTNAR IFQAQKPEDI
IGTLLEESGI TDYAFALRHD HAPREYCVQY RESDLAFVTR LVAEEGLYFF HEFEEGKHRV
VFADDAGALA KGPELFFNLA TQGLSEGEYV RRFRYAEAVS TAEVALKDYS FKTPAYGLLH
RKMSGELEHQ RETYQHFDYP GRFKKDPSGK AFTGYRLDAL RAGAMTGSGE SNAAMLMPGS
SFILTEHPNP TLNAAWQLVA ITHSGQQPQA LEEESGGEPT TYSNSFEVIS AKSTWRAGLP
YKPMVDGPQI ATVVGPSGEE IYCDEYGRIK LQFPWDRYGS SDDQSSCWVR VSQGWAGGQY
GLIAIPRIGH EVIVSFLEGD PDQPIVTGRT FHATNPSPYP LPANKTRTSL RTSTHKGAGF
NELRFEDQAG QEEVFIHAQK DMNTVVLNNR STTVTADHTE NIGGNQTVSV IKDQSTEIQG
QQTIAIHGNR STVIGTEGKG ESHESMQVKN NILIQSKQGG ILIANSIGFF SISDEGDITI
KGKTVTINGN RIDLN
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