Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2223 |
Symbol | |
ID | 8530623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2413326 |
End bp | 2414690 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | L-serine dehydratase 1 |
Protein accession | YP_003259600 |
Protein GI | 261821494 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAAGTG TTTTCGACAT GTTTAAGATC GGTATTGGCC CCTCTAGCTC TCATACGGTT GGACCGATGA AAGCCGGCAA GCAGTTTGTC GATGAATTGA TCAACCAAAA TTTACTGAAC GCGACCACGC GTATTGCCGT CGACGTTTAT GGATCGCTGT CGCTGACGGG TAAAGGCCAC CACACGGATA TCGCTATCAT CATGGGTCTG GCGGGAAACA TGCCTGATAC CGTTGATATT GATGCCATTC CTGGCTTTAT CCGCGATGTT GAACAACGCG AACGCCTGCT GCTGGCTAAC GGGCAGCACG AGGTGGATTT CCCCCGCGAA GGCGGTATGG TTTTCCGCAG CGAGAATTTG CCGCTGCACG AAAACGGCAT GACGATTACC GCTTTTGCCA GCAATAAAGA AATTTATAGC AAAACCTATT ACTCCATCGG GGGTGGGTTC ATCGTTGATG CCGAGAATTT TGGCAAAGAC GCCACCACTG ACGTATCCGT TCCCTATACC TTCCATTCTG CCAAAGAGAT GTTGGAACAC TGCAAACAGA GTGGCCTGTC ACTTTCCGGA ATGGTGATGC GTAACGAGCT GGCATTGCAC AGCCAGCAGG AGATTGAGGC GTATTTTGCC GATATCTGGC AAACGATGCG TGCTTGTATC GATCGCGGCA TGAACACCGA AGGCGTGTTG CCTGGGCCAC TGCGCGTACC ACGCCGTGCA TCTCCGTTAC GTCGTATGCT GGTGTCTTCC GATAAATTGT CCAACGACCC GATGAACGTG GTGGACTGGG TTAATATGTT CGCGCTGGCG GTGAACGAAG AAAACGCCGC AGGTGGCCGC GTGGTTACCG CACCAACAAA TGGCGCGTGC GGTATCGTTC CTGCTGTTCT TGCCTATTAC GATCACTTCA TCGAGCCGGT TAGCCCGACC ATTTATATTC GTTATTTCCT CGCGGCTGGC GCGGTCGGCA TTCTGTACAA AATGAACGCC TCCATCTCCG GTGCCGAGGT GGGTTGTCAA GGTGAAGTGG GCGTGGCCTG CTCCATGGCC GCGGCTGGAC TGGCAGAGCT AATGGGCGCG AGCCCAGAAC AGGTTTGTAT CGCCGCCGAG ATCGGTATGG AACACAACTT AGGCTTAACC TGCGATCCTG TTGCGGGTCA GGTACAAGTT CCGTGCATCG AACGTAACGC GATAGCTTCC GTTAAGGCGA TTAACGCTGC ACGTATGGCC ACCCGCCGCA CCAGTGAACC ACGCGTCTCG CTGGATAAGG TGATTGAGAC TATGTATGAA ACGGGGAAAG ACATGAACGC CAAATACCGC GAAACTTCAC GAGGCGGGCT GGCGATCAAA GTACAGTGTG ATTAA
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Protein sequence | MISVFDMFKI GIGPSSSHTV GPMKAGKQFV DELINQNLLN ATTRIAVDVY GSLSLTGKGH HTDIAIIMGL AGNMPDTVDI DAIPGFIRDV EQRERLLLAN GQHEVDFPRE GGMVFRSENL PLHENGMTIT AFASNKEIYS KTYYSIGGGF IVDAENFGKD ATTDVSVPYT FHSAKEMLEH CKQSGLSLSG MVMRNELALH SQQEIEAYFA DIWQTMRACI DRGMNTEGVL PGPLRVPRRA SPLRRMLVSS DKLSNDPMNV VDWVNMFALA VNEENAAGGR VVTAPTNGAC GIVPAVLAYY DHFIEPVSPT IYIRYFLAAG AVGILYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELMGA SPEQVCIAAE IGMEHNLGLT CDPVAGQVQV PCIERNAIAS VKAINAARMA TRRTSEPRVS LDKVIETMYE TGKDMNAKYR ETSRGGLAIK VQCD
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