Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0936 |
Symbol | |
ID | 8529309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1009844 |
End bp | 1011280 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | sugar (Glycoside-Pentoside-Hexuronide) transporter |
Protein accession | YP_003258361 |
Protein GI | 261820255 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAACA ATAATAAGCT GAGCGTTGCG GAGAAAATCG GCTTTGGCAT GGGCGATGCC GCCTGTGGCA TCGTTTATTC TTCCGTAACC ATGTTTCTTA CCTACTTTTA TACCGATATT TATGGCATCT CCGCCGCCGC AGTGGGGGTG ATGTTTCTAG TAACTCGCGT GCTGGATGCC ATCGTTGACC CGCTGATTGG CCTAGTTGCA GACCGCACCA AGACACGCTG GGGGCACTTT CGCCCGTGGC TGGTCTGGTT TGCCGTCCCC TACGCCGTGA TTGCCGTGTT GGCCTACACC ACACCGGAGC TGAATGGCAC CGGTAAACTG GTTTATGCCT ACATCACTTA CACGTTGCTG ATGCTGTTCT ACACCTTTAT CAACATTCCT TACTGCTCAC TCGGCGGTGT CATCACCAGC GATGAAAAAG ACAGAATTTC CGCGCAGTCG TATCGCTTTA CCATTTCTTC AATGGCAGGG CTATTGGTAT CGGTCGGCAC GCTGTGGCTA GTCGACTGGA TTGGCGGCAC CAACAAACAA TTAGGCTATC AGGGCACCAT GATGATTATG GGTAGTCTGG CTGTTGTGAT GCTGTTTTTT TGCTTCTTCA CCACAAACGA ACGCATCAAC CCTGCCGTAG ATAAAAATCA GAACGTCTGG GACGATGTCA GAAATCTGCT GAGCAACGAT CAGTGGCGCA TCGTGGCTAT TATTACCTTC TTTTCCAGCA TGGCAGGCGT CATGCGCGGC GCGGCGACGC TGTATTATGC AACCTACCTG ATGGTAGGGC CGGAACAAGG CAGCGCAGCC GGAACGGCGA TGAAATCCGC GTTTATCACC ACCAGCGTCG TCGGCACCAT TATTGGTGCG ATGATGGCGG GTTATTTTGG TAAACGCTTC AGCAGCATAA GTCTGTTCAA AAATATCAAC CTGTTGCTGG TGTTTGTCGG CATCATCTTA TTCATGGTGC CGCCACAGTG GCTGGCTGTC GTCTTCCCGC TCTACTTTTT GATCGGCTTT TTCCACCAGA TGTACCAACC GTTCAAATGG AACATGATGG CCAACGCCGC CGATTACGGC GAGTGGAAAA CGGGCCGCCG CATTACTGGT CTCTCTTTCT CTGGCAATCT GTTCGCCCTG AAACTGGGTA TGGCAATTGC GGGAGCCATC GTCGGTTTTT CACTCGGCTG GTTCGGCTAT GTGGCGGGTT CCCCCACACA AACGCCACTC GCCACAGCGG GTATTATCGG CTTACTGAGC ATCGGTCCAT CACTTTCCTA TCTGGTACTT TATTGGCTGG TACGTTTTTA CAAGCTGGAC GATAAAACGA TGGAAACTAT TCAGGCCGAT CTGGCGAAAC GCCACAACAC AGCCGACCGC GCGGCGGAAA GCGAACTTCC TGTCGATCAG GGCCTGACGC CAAAAGGCGC AGCCTGA
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Protein sequence | MTNNNKLSVA EKIGFGMGDA ACGIVYSSVT MFLTYFYTDI YGISAAAVGV MFLVTRVLDA IVDPLIGLVA DRTKTRWGHF RPWLVWFAVP YAVIAVLAYT TPELNGTGKL VYAYITYTLL MLFYTFINIP YCSLGGVITS DEKDRISAQS YRFTISSMAG LLVSVGTLWL VDWIGGTNKQ LGYQGTMMIM GSLAVVMLFF CFFTTNERIN PAVDKNQNVW DDVRNLLSND QWRIVAIITF FSSMAGVMRG AATLYYATYL MVGPEQGSAA GTAMKSAFIT TSVVGTIIGA MMAGYFGKRF SSISLFKNIN LLLVFVGIIL FMVPPQWLAV VFPLYFLIGF FHQMYQPFKW NMMANAADYG EWKTGRRITG LSFSGNLFAL KLGMAIAGAI VGFSLGWFGY VAGSPTQTPL ATAGIIGLLS IGPSLSYLVL YWLVRFYKLD DKTMETIQAD LAKRHNTADR AAESELPVDQ GLTPKGAA
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