| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_2001 |
|---|
| Symbol | |
|---|
| ID | 8492009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 2003328 |
|---|
| End bp | 2004179 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646359990 |
|---|
| Product | Bifunctional DNA primase/polymerase |
|---|
| Protein accession | YP_003239929 |
|---|
| Protein GI | 260893832 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.185171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC TGGCCGAAGC CGCAGTTTAC TATGCCGAAA GGTTCGGCTG GGCGGTGCTC
CCATTGCATT CAATCGCAGG TGGCCGCTGC ACCTGCGGGC GGGTGGACTG CCCCAGCCCC
GGCAAGCACC CCCTTACGCG GCACGGCGTG AAAGAAGCCA GCAAAGACTC AGAGGCCATC
GCGGCCTGGT GGCGCAGGTG GCCCTGGGCC AACATTGGGA TCGCTACCGG CAAAGCCAGT
GGCTTCTTCG TGCTGGACGT CGATGGCCCT GAAGGCGAGG ATTCCCTCTA CGAACTGGTG
AGGCGGCACG GCGAGCTGCC GGAGACCGTG GAGCAAATCA CCGGCTCGGG TGGCCGCCAC
CTGCTCTTCC GGATGCCTGA GGGCCGGGCC ATCGGGAACA AAGTGAGGCT GGCTCCCGGT
CTGGACGTTC GCGGGGAGGG CGGCTACATC GTGGCGGCAC CCTCAATCCA CGCTGGTGGG
AGGCGGTACG AATGGGAATT TTCTTCCAGG CCGGGCGAGG TTCAGATCGC CGAAGCACCG
GGTTGGCTCT TAGAGCTTCT GGCCGGGCCA GCGGAGGGTT TAGGCCGCCC GGTGGAGGTG
TGGCGACAGC TGGTCTCCGA GGGCGTGGAG GAAGGCCAGC GCAACAACTC GATCGCCGCT
TTGGCCGGGC ACCTGCTACG GAAGAGGGTC GATCCCTACG TGGCGCTAGA CCTGCTTCTG
GCTTGGAACC AGGTCAAGTG CAGGCCACCC CTTCCGGACG AAGAAGTGGT GCGCACGGTG
GACAGCATCG CAAAGAAAGA GCTGGAAAGG AGGCTAGGGA AATGGTGGAG ATGGAGCACA
TCAGGCGCTT AG
|
|---|
| Protein sequence | MSELAEAAVY YAERFGWAVL PLHSIAGGRC TCGRVDCPSP GKHPLTRHGV KEASKDSEAI
AAWWRRWPWA NIGIATGKAS GFFVLDVDGP EGEDSLYELV RRHGELPETV EQITGSGGRH
LLFRMPEGRA IGNKVRLAPG LDVRGEGGYI VAAPSIHAGG RRYEWEFSSR PGEVQIAEAP
GWLLELLAGP AEGLGRPVEV WRQLVSEGVE EGQRNNSIAA LAGHLLRKRV DPYVALDLLL
AWNQVKCRPP LPDEEVVRTV DSIAKKELER RLGKWWRWST SGA
|
|---|
| |