| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1985 |
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| Symbol | |
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| ID | 8491992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1989632 |
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| End bp | 1990921 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646359974 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003239914 |
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| Protein GI | 260893817 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCGCGGG CGGCGAAAGT GGGGATAGCT TTAGCCGTGC TGCTGGGGGC GGGCGTGGTG
GTGGCAGCCG TGTGGCGCGG CCTGCACCCT CCGGGAACAC CGGTGAAGGT GGCTTTGGCT
GAAGAGAGGA CTTTCGAAGA TAAGGTGCTG GCCACCGGAA AGGTGGAGCC GGAAGAAGAG
ATCGATGTGA CTTCTCCCAT CGCAGCCAAG CTTTTGAGGC TGGCGGTGCG GGAGGGGGAC
CGGGTGAAGG CGGGCCAGCT CCTGGCCGAG CTCGACACCG GTGACCTGGA AGACAAGGTG
AAGAGTGCCC AGGCGGCACT CGCGGTGGCG GAGGCGGAAC TTTTGGCGCT CAGGCAAGCG
CGGCCGGAGG ATATCGCTCA GGCCGAAGCG GCGGTTAGAG AAGCGGAGGA GTCCTTGGAG
GAGGCGCGGG CGGTGGCGGA TACCGCCCAA AAGAAGCTGG AGCGCTACCG CTTCCTCCGG
AACCAGGGGG CGGTGTCGGT GGCTGAACTG GAGGCGGTGG AGGCCGAGGC GGCCAGGGCT
CAGGCCCAGG TGCGCGCAGC CGAGGCCCGG CTGGAGTCGG CCCGAGCCCG GCTGCAGGCC
CTGAAGAACC CCGACCCCCA GAAGATAGCG GTGCAGGAGG CGCGGGTGAA CCAGGCCCGG
GTGGCGTTAG AGGAGGCTCG CTGCCAGCTG GCCAAGGGGA AGATTACGGC TCCGGCGGAC
GGAGTGGTGT TGCAGATCGG TCCCCGCGAG GGAGACTTCC TGCAGCCCGG GGCCTTCATC
TTGAAGCTAG GGGATGTGAA CCGGGTGCGG GTAGTGGCGG AGCTCAGCGA GCAGGACCTC
GCCGGCATAA AAGCGGGGCA GAGAGGGGTG GTGACCTGGT CGGCCTATCC GGGTAAGGAG
TGGTCGGCTG TGGTGGAGCG CTTGAGCCCG ATGGTTACCA GGAAGAGCGA GCAGGGTGCG
GAGACCATCT TTAAGGTTTA CCTCCGGCCG GAGAAAGAGG GCCTTTTGCC GGGGGCCAGG
GTGGACGTTT CGATCTACCG CGCCCTACCC CGGAAGTCGG TGCTGGTCCC CTTAGAGGCC
GTGTTCGGCA GCGATAGGGA AAAGTTCGTC ATGGTGGTGG AGAACGGGGT GGTGCGGCGG
CAAAAGGTGA CGGTAGGCGG GAGCAACGAG CTTTACACCG AAATAAAGGA AGGGCTTAAA
CCGGGAACCA TGGTGGTGCT CAACCCCCGG CAGGTCAAAG AGGGGGAGCG GGTGCGACCC
GAGGGACTTC CCGGTCAGAC CAGAGGCTGA
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| Protein sequence | MSRAAKVGIA LAVLLGAGVV VAAVWRGLHP PGTPVKVALA EERTFEDKVL ATGKVEPEEE
IDVTSPIAAK LLRLAVREGD RVKAGQLLAE LDTGDLEDKV KSAQAALAVA EAELLALRQA
RPEDIAQAEA AVREAEESLE EARAVADTAQ KKLERYRFLR NQGAVSVAEL EAVEAEAARA
QAQVRAAEAR LESARARLQA LKNPDPQKIA VQEARVNQAR VALEEARCQL AKGKITAPAD
GVVLQIGPRE GDFLQPGAFI LKLGDVNRVR VVAELSEQDL AGIKAGQRGV VTWSAYPGKE
WSAVVERLSP MVTRKSEQGA ETIFKVYLRP EKEGLLPGAR VDVSIYRALP RKSVLVPLEA
VFGSDREKFV MVVENGVVRR QKVTVGGSNE LYTEIKEGLK PGTMVVLNPR QVKEGERVRP
EGLPGQTRG
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