| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1908 |
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| Symbol | |
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| ID | 8491912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1913095 |
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| End bp | 1914318 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646359895 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003239838 |
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| Protein GI | 260893741 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCTCC TGCCGAAAAT CGTAGGACTA TCTGTGCCCG TAAGGAAGAT GATTAAGGTA
TCCTTGATTA TTGTCCTGCT AACGGTCTTG GCCCTGTTAG TAGGCTCAAA GGTTGTTGCG
TTACGCCGGC TTCCGCCCCT GATTCAGGAA ACAGGCCTTC CTGTGGAAAC AGTGGCAGTA
AGTGTCGGCT CCATAATGGA GTGCTTGGAC TATACCGGAA CGGTTGAATC CGCTCATCGA
GCATCCCTTT CTCCCAGGAT AATGGCGGGA ATTAGAACGG TTACGGTTAA AGAAGGGGAC
CGGGTGACCA GGGGCCAGGT GCTGGTGGTT TTAGATGATA AGGAATTAAA AGACCGCTTA
AACCAGGCAG CAGCGGCGGT GGAGCAGGCC AGGGCGGCCC TGGAACAGGC CGAGGGATCT
CTTTCCGTTA GTAGAGCCAA TTTAGAAAAA GCTACAATTA ATTATAAGCG GGGAAAAGAG
TTGTTGGCTG CTGGAGCTAT ACCTCCGTCC GTTTTTGAAA ACCAGTATGA ACTCCCCTAT
TTACAAGCAA AAGAATCAGC AGAACGCATT GTTCCTGCTC AGGTAGAGGC GGCTAGGGCC
CAGCTGGCCC AAGCCGAAGC TGGCCTGGCG TTAGCTAAGT CTGCTTATGA GGATGCAATT
ATCAGAGCGC CTTTTGATGG TGTAGTCACC GCCGTACATA GCTATCCCGG TGATCTAGCT
GTGCCAGGCA AACCAATTCT CACCTTAGAT GATCCTGGAA AAATGGTCGT GCGGGTAAAA
GTAGCCGAAG TAGACTTGCC CCTTTTAAAA GTAGGGCAAA AAGCAACGCT GCGCTATCCC
AGCGGGCAAG AAACCGCCTC GCAGGTTTCC CGTATTTACC CGGCGGAAGA TCCCCTCACC
CGCAGCACCA TTGTAGAGCT ACCGGTTTCT TCTCCCGGAG TCAAGCCAGG AATGAGCGTA
GAAGTTTCAT TTGTAGTCGG CCGGAACGAA CGAGCTTTAC TGGTTCCCCG CCGAGCAGTG
AAAATGGAGC AGGGGAGGGC GTGGGTATTC ATTGTCAAAA GTGGCAGGGC GGTACAGGTA
CCGGTAACCC TGGGATTAAA GAACAAGACG CACTGCGAAG TAAAGGGAGA CCTGAAACCC
GGCGACCAGG TAGTAGTGTC CGATTTGACC AGACTTTATG ACGGAAGACG AGTTTTTGTG
TATCAGGAGA GGAGAAAATC ATGA
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| Protein sequence | MNLLPKIVGL SVPVRKMIKV SLIIVLLTVL ALLVGSKVVA LRRLPPLIQE TGLPVETVAV
SVGSIMECLD YTGTVESAHR ASLSPRIMAG IRTVTVKEGD RVTRGQVLVV LDDKELKDRL
NQAAAAVEQA RAALEQAEGS LSVSRANLEK ATINYKRGKE LLAAGAIPPS VFENQYELPY
LQAKESAERI VPAQVEAARA QLAQAEAGLA LAKSAYEDAI IRAPFDGVVT AVHSYPGDLA
VPGKPILTLD DPGKMVVRVK VAEVDLPLLK VGQKATLRYP SGQETASQVS RIYPAEDPLT
RSTIVELPVS SPGVKPGMSV EVSFVVGRNE RALLVPRRAV KMEQGRAWVF IVKSGRAVQV
PVTLGLKNKT HCEVKGDLKP GDQVVVSDLT RLYDGRRVFV YQERRKS
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