| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1867 |
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| Symbol | |
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| ID | 8491871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1866064 |
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| End bp | 1867044 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 646359856 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_003239799 |
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| Protein GI | 260893702 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.712125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAA CCGCTGACTT CTTTTCCTTA CTCTCTTCCG GCTTCCCTAT AGTACTGGCT
CCCATGGCTG GCATAACTGA CCGCGCCTTC CGCCTAGTGG CTCGCGAAGG CGGGGCGCGC
CTCTGCTGGA CGGAGATGCT ACCGGCTCCG GCCCTGGCCC GCTCTTCCGA GGCGAGAAAG
CACCTGCTCG ACTTTCTGGG AGAAGAAGGG GTGGTAGCCC AGCTTTTCGG CAGCGATCCG
GAGGAGATGG CGGAGGCAGC CCTGGTGGTG GAAGAAGCGG GGGCGGTGGC GGTCGACCTC
AATATGGGCT GCCCGGTGGA AAAGGTGGTG AAGATAGGAG CAGGAGCAGC TCTTTTGCGC
GACCCGCGCC AGGCGGCGGC TATAGTGGAG GCGGTTTGCC GGCGGGTAAA GGTGCCGGTC
ACCGTCAAGC TGCGTAAAGG CTGGGACGAG AAGAGTCCCC CGGCCTGGGA GATGGCCCGC
CTGCTGGAGG AAGCTGGGGC TAAGGCGCTC ATCGTGCACG GGCGCTACCG GCACGAGTTT
TTCGGGGGAC GGGCCGACTG GGAGGCCATA CGGAGGGTCA AAGAAGCCGT GAAAATTCCC
GTCATAGGCA ACGGCGACGT GCGGACTCCG GAAGATGCCC TGCGGATGCT TGCTTCGACC
GGTTGTGACG GGGTTATGGT AGGAAGGGCG GCACGGGGCA ACCCCTGGAT TTTCACCCGC
TGTCAGCTAT ACTCTCTCAG CGGCGAGATA CCTCCTCCTC CTTCGCCGGC GGAACGGGTG
GCTCAGGGCT TAAAGCATCT GGCCTTACTG GAGGCGCTTT ACGGCGATAA GGCGCTCAAC
CGGGGAAGGA TGGTGGTGGA CTGGTATACA CGCGGCTTGC CCGGAGCCTC TGCCCTCCGG
GGTCAGGCCT ACCAGGCCCG CGATTTTGCT GCCCTCCGGT CTCTCCTGGA AAGATACCTC
TATCAGGTAC AAACGTGCTA A
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| Protein sequence | MSATADFFSL LSSGFPIVLA PMAGITDRAF RLVAREGGAR LCWTEMLPAP ALARSSEARK
HLLDFLGEEG VVAQLFGSDP EEMAEAALVV EEAGAVAVDL NMGCPVEKVV KIGAGAALLR
DPRQAAAIVE AVCRRVKVPV TVKLRKGWDE KSPPAWEMAR LLEEAGAKAL IVHGRYRHEF
FGGRADWEAI RRVKEAVKIP VIGNGDVRTP EDALRMLAST GCDGVMVGRA ARGNPWIFTR
CQLYSLSGEI PPPPSPAERV AQGLKHLALL EALYGDKALN RGRMVVDWYT RGLPGASALR
GQAYQARDFA ALRSLLERYL YQVQTC
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