| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1271 |
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| Symbol | secF |
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| ID | 8491263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1278371 |
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| End bp | 1279261 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646359276 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_003239231 |
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| Protein GI | 260893134 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCTTGC ACTTCGTTCG CTGGCGTTTC CTCTGGTATG CCCTGTCTTT AGCCGTGATC
CTGCCGGGCC TGGTATCGCT CTTCCTGAGG GGCTTGAACC TGGGGATAGA CTTCACTGGC
GGAAGCCTCA TAGAGGTGGA GTTTCATCGC CCGGTGGAAA TTGCCGAAGT AAGGCAGGTG
ATGGCGAGCT TCGGCCTACA AGACGCCCTC ATCCAGAAGA GCGGTACTTC GGTCTTTCTC
ATCCGGACCC GTCCCTTGGA GGAAAAACAA AGCCAAGAGG TAGTGAAGGC TCTGGAGCAA
AAGATAGGAC CGCTTACTCT CCTGCGTTCG GAGAAGGTGG GACCGGTCAT CGGCAAGGAG
CTTACCCGCA AGGCCTTCCT GGCTTCGGGG CTTTCCCTGG TCATCCTCCT CATTTACCTG
GCCATCCGCT TCGACTTCAA GCAGGGTGTG GCGGCCATAA TCGGCCTGGT GCACGATGTG
CTGGTGGTTC TGGGTATATT TTCTATCTTC CAGCTAGAGG TAGACAGTTC CTTCGTAGCG
GCGGTACTTA CCACCTTGGG CTACTCCCTG CACGACACGG TCATCGTTTT CGACCGCATC
CGTGAAAACA TCAAGATAAG GAAGCTCAGC GAGCCTCTGG CCGACGTCAT CAACCTCAGC
ATCTGGCAGA CCTTGACGCG CTCCATAAAC ACTGTCATGA CGGTACTTTT TGTGCTGGTG
GCCCTCTACT TCCTGGGGGG TAGCACCCTA CGCAACTTCG TCCTGGCCCT GATTATAGGC
GTGATAAGTG GCGCCTATAG TTCCGTCTGC GATGCCAGCC CTATCTGGTA CGACCTCAAG
CGCTGGGAAG AGAAGCGGCG GGCCAAGGCC CTGAAGGCGA GGAGGGCTTG A
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| Protein sequence | MRLHFVRWRF LWYALSLAVI LPGLVSLFLR GLNLGIDFTG GSLIEVEFHR PVEIAEVRQV
MASFGLQDAL IQKSGTSVFL IRTRPLEEKQ SQEVVKALEQ KIGPLTLLRS EKVGPVIGKE
LTRKAFLASG LSLVILLIYL AIRFDFKQGV AAIIGLVHDV LVVLGIFSIF QLEVDSSFVA
AVLTTLGYSL HDTVIVFDRI RENIKIRKLS EPLADVINLS IWQTLTRSIN TVMTVLFVLV
ALYFLGGSTL RNFVLALIIG VISGAYSSVC DASPIWYDLK RWEEKRRAKA LKARRA
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