Gene Adeg_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_0976 
Symbol 
ID8490962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand+ 
Start bp991153 
End bp991686 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content57% 
IMG OID646359000 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_003238961 
Protein GI260892864 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCATTTG AAAGTAAACC CTCTCCCGAT TACCCTTCCT CTCCGAAGGT CATTGGGAGC 
TACGTCCAGG CTTTCCTCAT CTGTCCCCGG CAGGTCTGGC TCATGTCCCG CCAGATCTGC 
CCGGACGAAG ACCACGAGCT TTTGCAGATC GGGCGGCTCA TTCAAAGCCA AAGCTACGCC 
CGCGAACGTA AAGAGGTGCA CATTGAGCAC CTGGCCCTGG ATCTCGTTCG CCGCGCGGGC 
AAAAACTTCG TGGTGGCCGA GGTCAAAAAG AGCTCCCGCG CCGCCGAAGC GGCCCGGATG 
CAACTGGCCT TTTACCTTTA CGAACTCAAG CAGATGGGCC TGGAGGCCGA AGGGGAGCTC 
CTTTTTCCGG AAGAGAGGAG GAAGGAGTAT CTAGTGCTGA CGCCGGAGCT GGAAGCAAAG 
ATAGTCAAGA TGAAGGAAGA TATAGTCCAG ATCATAGCTC GCCCGATTCC TCCTGCTCCG 
GCGCGCACTC GCTTCTGCGG TAAGTGCGCC TACGCCGAAT TTTGCTGGGC ATGA
 
Protein sequence
MAFESKPSPD YPSSPKVIGS YVQAFLICPR QVWLMSRQIC PDEDHELLQI GRLIQSQSYA 
RERKEVHIEH LALDLVRRAG KNFVVAEVKK SSRAAEAARM QLAFYLYELK QMGLEAEGEL 
LFPEERRKEY LVLTPELEAK IVKMKEDIVQ IIARPIPPAP ARTRFCGKCA YAEFCWA